Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smarcd3Q6P9Z1 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
Smarcd3Q6P9Z1 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Smarcd3Q6P9Z1 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smarcd3Q6P9Z1 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smarcd3Q6P9Z1 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smarcd3Q6P9Z1 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Smarcd3Q6P9Z1 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Smarcd3Q6P9Z1 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smarcd3Q6P9Z1 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smarcd3Q6P9Z1 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.56□□□□□ -0.56
Smarcd3Q6P9Z1 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Smarcd3Q6P9Z1 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smarcd3Q6P9Z1 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Smarcd3Q6P9Z1 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smarcd3Q6P9Z1 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smarcd3Q6P9Z1 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Smarcd3Q6P9Z1 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Smarcd3Q6P9Z1 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smarcd3Q6P9Z1 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.56□□□□□ -0.56
Smarcd3Q6P9Z1 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.56□□□□□ -0.56
Smarcd3Q6P9Z1 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Smarcd3Q6P9Z1 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Smarcd3Q6P9Z1 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC11.56□□□□□ -0.56
Smarcd3Q6P9Z1 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Smarcd3Q6P9Z1 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smarcd3Q6P9Z1 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smarcd3Q6P9Z1 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smarcd3Q6P9Z1 Gm11618-201ENSMUST00000117946 267 ntBASIC11.56□□□□□ -0.56
Smarcd3Q6P9Z1 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smarcd3Q6P9Z1 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.56□□□□□ -0.56
Smarcd3Q6P9Z1 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC11.56□□□□□ -0.56
Smarcd3Q6P9Z1 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Smarcd3Q6P9Z1 Gm6473-201ENSMUST00000188572 1210 ntBASIC11.56□□□□□ -0.56
Smarcd3Q6P9Z1 Gm45668-201ENSMUST00000211271 493 ntBASIC11.56□□□□□ -0.56
Smarcd3Q6P9Z1 AC135669.1-201ENSMUST00000213585 412 ntBASIC11.56□□□□□ -0.56
Smarcd3Q6P9Z1 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smarcd3Q6P9Z1 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Smarcd3Q6P9Z1 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Smarcd3Q6P9Z1 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smarcd3Q6P9Z1 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Smarcd3Q6P9Z1 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Smarcd3Q6P9Z1 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Smarcd3Q6P9Z1 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smarcd3Q6P9Z1 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smarcd3Q6P9Z1 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Smarcd3Q6P9Z1 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Smarcd3Q6P9Z1 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.56□□□□□ -0.56
Smarcd3Q6P9Z1 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smarcd3Q6P9Z1 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smarcd3Q6P9Z1 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smarcd3Q6P9Z1 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Smarcd3Q6P9Z1 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smarcd3Q6P9Z1 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Smarcd3Q6P9Z1 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.55□□□□□ -0.56
Smarcd3Q6P9Z1 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smarcd3Q6P9Z1 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Smarcd3Q6P9Z1 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smarcd3Q6P9Z1 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smarcd3Q6P9Z1 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Smarcd3Q6P9Z1 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smarcd3Q6P9Z1 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smarcd3Q6P9Z1 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Smarcd3Q6P9Z1 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smarcd3Q6P9Z1 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smarcd3Q6P9Z1 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smarcd3Q6P9Z1 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC11.55□□□□□ -0.56
Smarcd3Q6P9Z1 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smarcd3Q6P9Z1 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smarcd3Q6P9Z1 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Smarcd3Q6P9Z1 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Smarcd3Q6P9Z1 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
Smarcd3Q6P9Z1 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Smarcd3Q6P9Z1 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smarcd3Q6P9Z1 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smarcd3Q6P9Z1 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC11.55□□□□□ -0.56
Smarcd3Q6P9Z1 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC11.55□□□□□ -0.56
Smarcd3Q6P9Z1 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smarcd3Q6P9Z1 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC11.55□□□□□ -0.56
Smarcd3Q6P9Z1 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC11.55□□□□□ -0.56
Smarcd3Q6P9Z1 Arhgef33-209ENSMUST00000225223 714 ntBASIC11.55□□□□□ -0.56
Smarcd3Q6P9Z1 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.55□□□□□ -0.56
Smarcd3Q6P9Z1 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smarcd3Q6P9Z1 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Smarcd3Q6P9Z1 Mir339-201ENSMUST00000083659 96 ntBASIC11.55□□□□□ -0.56
Smarcd3Q6P9Z1 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Smarcd3Q6P9Z1 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Smarcd3Q6P9Z1 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smarcd3Q6P9Z1 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smarcd3Q6P9Z1 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smarcd3Q6P9Z1 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smarcd3Q6P9Z1 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Smarcd3Q6P9Z1 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smarcd3Q6P9Z1 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.55□□□□□ -0.56
Smarcd3Q6P9Z1 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
Smarcd3Q6P9Z1 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.55□□□□□ -0.56
Smarcd3Q6P9Z1 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Smarcd3Q6P9Z1 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.54□□□□□ -0.56
Smarcd3Q6P9Z1 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smarcd3Q6P9Z1 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms