Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC14.1□□□□□ -0.15
Usp49Q6P9L4 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp49Q6P9L4 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp49Q6P9L4 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp49Q6P9L4 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp49Q6P9L4 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC14.1□□□□□ -0.15
Usp49Q6P9L4 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC14.1□□□□□ -0.15
Usp49Q6P9L4 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC14.1□□□□□ -0.15
Usp49Q6P9L4 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp49Q6P9L4 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp49Q6P9L4 Gm18584-201ENSMUST00000203098 964 ntBASIC14.1□□□□□ -0.15
Usp49Q6P9L4 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp49Q6P9L4 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC14.1□□□□□ -0.15
Usp49Q6P9L4 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC14.1□□□□□ -0.15
Usp49Q6P9L4 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC14.1□□□□□ -0.15
Usp49Q6P9L4 AC108416.1-202ENSMUST00000228927 1201 ntBASIC14.1□□□□□ -0.15
Usp49Q6P9L4 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp49Q6P9L4 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp49Q6P9L4 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp49Q6P9L4 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC14.1□□□□□ -0.15
Usp49Q6P9L4 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp49Q6P9L4 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Usp49Q6P9L4 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp49Q6P9L4 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp49Q6P9L4 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Usp49Q6P9L4 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp49Q6P9L4 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp49Q6P9L4 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp49Q6P9L4 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Usp49Q6P9L4 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp49Q6P9L4 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC14.1□□□□□ -0.15
Usp49Q6P9L4 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp49Q6P9L4 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Usp49Q6P9L4 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp49Q6P9L4 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Usp49Q6P9L4 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp49Q6P9L4 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.09□□□□□ -0.15
Usp49Q6P9L4 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp49Q6P9L4 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp49Q6P9L4 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
Usp49Q6P9L4 Gm12957-201ENSMUST00000117835 377 ntBASIC14.09□□□□□ -0.15
Usp49Q6P9L4 Gm11658-201ENSMUST00000120913 1008 ntBASIC14.09□□□□□ -0.15
Usp49Q6P9L4 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC14.09□□□□□ -0.15
Usp49Q6P9L4 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC14.09□□□□□ -0.15
Usp49Q6P9L4 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp49Q6P9L4 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC14.09□□□□□ -0.15
Usp49Q6P9L4 Gm2467-201ENSMUST00000182266 1010 ntBASIC14.09□□□□□ -0.15
Usp49Q6P9L4 Gm6981-201ENSMUST00000182467 1008 ntBASIC14.09□□□□□ -0.15
Usp49Q6P9L4 Gm9022-201ENSMUST00000182482 992 ntBASIC14.09□□□□□ -0.15
Usp49Q6P9L4 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC14.09□□□□□ -0.15
Usp49Q6P9L4 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC14.09□□□□□ -0.15
Usp49Q6P9L4 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC14.09□□□□□ -0.15
Usp49Q6P9L4 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC14.09□□□□□ -0.15
Usp49Q6P9L4 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp49Q6P9L4 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp49Q6P9L4 Gm22058-201ENSMUST00000083393 310 ntBASIC14.09□□□□□ -0.15
Usp49Q6P9L4 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC14.09□□□□□ -0.15
Usp49Q6P9L4 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC14.09□□□□□ -0.15
Usp49Q6P9L4 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp49Q6P9L4 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp49Q6P9L4 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp49Q6P9L4 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp49Q6P9L4 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp49Q6P9L4 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp49Q6P9L4 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp49Q6P9L4 Nudt18-202ENSMUST00000228554 3619 ntBASIC14.09□□□□□ -0.15
Usp49Q6P9L4 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp49Q6P9L4 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Usp49Q6P9L4 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Usp49Q6P9L4 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC14.09□□□□□ -0.15
Usp49Q6P9L4 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Usp49Q6P9L4 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Usp49Q6P9L4 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Usp49Q6P9L4 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Usp49Q6P9L4 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC14.08□□□□□ -0.15
Usp49Q6P9L4 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC14.08□□□□□ -0.15
Usp49Q6P9L4 Gm7789-202ENSMUST00000211273 1400 ntBASIC14.08□□□□□ -0.15
Usp49Q6P9L4 Gm36970-201ENSMUST00000193688 1859 ntBASIC14.08□□□□□ -0.16
Usp49Q6P9L4 Gm44241-201ENSMUST00000203230 1662 ntBASIC14.08□□□□□ -0.16
Usp49Q6P9L4 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp49Q6P9L4 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp49Q6P9L4 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Usp49Q6P9L4 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Usp49Q6P9L4 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Usp49Q6P9L4 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Usp49Q6P9L4 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC14.08□□□□□ -0.16
Usp49Q6P9L4 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC14.08□□□□□ -0.16
Usp49Q6P9L4 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp49Q6P9L4 Gm9630-201ENSMUST00000178304 885 ntBASIC14.08□□□□□ -0.16
Usp49Q6P9L4 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC14.08□□□□□ -0.16
Usp49Q6P9L4 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC14.08□□□□□ -0.16
Usp49Q6P9L4 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp49Q6P9L4 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp49Q6P9L4 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Usp49Q6P9L4 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.08□□□□□ -0.16
Usp49Q6P9L4 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp49Q6P9L4 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp49Q6P9L4 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Usp49Q6P9L4 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp49Q6P9L4 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms