Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Gm22920-201ENSMUST00000102175 109 ntBASIC19.06■□□□□ 0.64
Slx4Q6P1D7 Gm13182-201ENSMUST00000122241 312 ntBASIC19.06■□□□□ 0.64
Slx4Q6P1D7 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC19.06■□□□□ 0.64
Slx4Q6P1D7 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Slx4Q6P1D7 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC19.06■□□□□ 0.64
Slx4Q6P1D7 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Slx4Q6P1D7 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Slx4Q6P1D7 Gm5714-201ENSMUST00000197343 566 ntBASIC19.06■□□□□ 0.64
Slx4Q6P1D7 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Slx4Q6P1D7 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Slx4Q6P1D7 AC134860.1-201ENSMUST00000224867 660 ntBASIC19.06■□□□□ 0.64
Slx4Q6P1D7 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Slx4Q6P1D7 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slx4Q6P1D7 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slx4Q6P1D7 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slx4Q6P1D7 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slx4Q6P1D7 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slx4Q6P1D7 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slx4Q6P1D7 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slx4Q6P1D7 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slx4Q6P1D7 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
Slx4Q6P1D7 Gm11663-201ENSMUST00000117888 290 ntBASIC19.05■□□□□ 0.64
Slx4Q6P1D7 Gm11354-201ENSMUST00000121974 422 ntBASIC19.05■□□□□ 0.64
Slx4Q6P1D7 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC19.05■□□□□ 0.64
Slx4Q6P1D7 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC19.05■□□□□ 0.64
Slx4Q6P1D7 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC19.05■□□□□ 0.64
Slx4Q6P1D7 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Slx4Q6P1D7 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Slx4Q6P1D7 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slx4Q6P1D7 CT485606.1-201ENSMUST00000213187 878 ntBASIC19.05■□□□□ 0.64
Slx4Q6P1D7 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Slx4Q6P1D7 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slx4Q6P1D7 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slx4Q6P1D7 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC19.04■□□□□ 0.64
Slx4Q6P1D7 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slx4Q6P1D7 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slx4Q6P1D7 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slx4Q6P1D7 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
Slx4Q6P1D7 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC19.04■□□□□ 0.64
Slx4Q6P1D7 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC19.04■□□□□ 0.64
Slx4Q6P1D7 Gm11836-201ENSMUST00000121022 441 ntBASIC19.04■□□□□ 0.64
Slx4Q6P1D7 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slx4Q6P1D7 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC19.04■□□□□ 0.64
Slx4Q6P1D7 Gm8815-201ENSMUST00000173809 620 ntBASIC19.04■□□□□ 0.64
Slx4Q6P1D7 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Slx4Q6P1D7 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC19.04■□□□□ 0.64
Slx4Q6P1D7 Gm17889-201ENSMUST00000198410 598 ntBASIC19.04■□□□□ 0.64
Slx4Q6P1D7 Mir483-201ENSMUST00000093631 73 ntBASIC19.04■□□□□ 0.64
Slx4Q6P1D7 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Slx4Q6P1D7 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Slx4Q6P1D7 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slx4Q6P1D7 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Slx4Q6P1D7 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Slx4Q6P1D7 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Slx4Q6P1D7 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slx4Q6P1D7 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slx4Q6P1D7 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Slx4Q6P1D7 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slx4Q6P1D7 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slx4Q6P1D7 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slx4Q6P1D7 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Slx4Q6P1D7 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Slx4Q6P1D7 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slx4Q6P1D7 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slx4Q6P1D7 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Slx4Q6P1D7 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Slx4Q6P1D7 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slx4Q6P1D7 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slx4Q6P1D7 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Slx4Q6P1D7 Gm15744-201ENSMUST00000161734 213 ntBASIC19.03■□□□□ 0.64
Slx4Q6P1D7 Gm18367-201ENSMUST00000176139 600 ntBASIC19.03■□□□□ 0.64
Slx4Q6P1D7 Gm3551-201ENSMUST00000190750 664 ntBASIC19.03■□□□□ 0.64
Slx4Q6P1D7 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC19.03■□□□□ 0.64
Slx4Q6P1D7 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC19.03■□□□□ 0.64
Slx4Q6P1D7 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC19.03■□□□□ 0.64
Slx4Q6P1D7 Gm18041-201ENSMUST00000218210 618 ntBASIC19.03■□□□□ 0.64
Slx4Q6P1D7 Gm6722-201ENSMUST00000221586 390 ntBASIC19.03■□□□□ 0.64
Slx4Q6P1D7 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Slx4Q6P1D7 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC19.03■□□□□ 0.64
Slx4Q6P1D7 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Slx4Q6P1D7 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slx4Q6P1D7 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slx4Q6P1D7 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Slx4Q6P1D7 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slx4Q6P1D7 Gm13910-201ENSMUST00000121752 1428 ntBASIC19.03■□□□□ 0.64
Slx4Q6P1D7 Gm7537-201ENSMUST00000221660 1414 ntBASIC19.03■□□□□ 0.64
Slx4Q6P1D7 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC19.03■□□□□ 0.64
Slx4Q6P1D7 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slx4Q6P1D7 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slx4Q6P1D7 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slx4Q6P1D7 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slx4Q6P1D7 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slx4Q6P1D7 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Slx4Q6P1D7 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slx4Q6P1D7 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC19.02■□□□□ 0.64
Slx4Q6P1D7 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC19.02■□□□□ 0.64
Slx4Q6P1D7 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Slx4Q6P1D7 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Slx4Q6P1D7 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Slx4Q6P1D7 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms