Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.16□□□□□ -0.46
Sdc3Q64519 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.16□□□□□ -0.46
Sdc3Q64519 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.16□□□□□ -0.46
Sdc3Q64519 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sdc3Q64519 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sdc3Q64519 Gm2991-201ENSMUST00000173338 480 ntBASIC12.16□□□□□ -0.46
Sdc3Q64519 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.16□□□□□ -0.46
Sdc3Q64519 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Sdc3Q64519 Gm37489-201ENSMUST00000191883 159 ntBASIC12.16□□□□□ -0.46
Sdc3Q64519 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.16□□□□□ -0.46
Sdc3Q64519 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.16□□□□□ -0.46
Sdc3Q64519 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.16□□□□□ -0.46
Sdc3Q64519 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sdc3Q64519 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Sdc3Q64519 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.16□□□□□ -0.46
Sdc3Q64519 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Sdc3Q64519 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.16□□□□□ -0.46
Sdc3Q64519 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sdc3Q64519 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sdc3Q64519 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sdc3Q64519 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sdc3Q64519 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sdc3Q64519 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sdc3Q64519 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sdc3Q64519 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sdc3Q64519 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sdc3Q64519 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Sdc3Q64519 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sdc3Q64519 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.16□□□□□ -0.46
Sdc3Q64519 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sdc3Q64519 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Sdc3Q64519 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sdc3Q64519 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sdc3Q64519 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sdc3Q64519 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sdc3Q64519 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sdc3Q64519 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sdc3Q64519 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.15□□□□□ -0.46
Sdc3Q64519 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Sdc3Q64519 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sdc3Q64519 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sdc3Q64519 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sdc3Q64519 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sdc3Q64519 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
Sdc3Q64519 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sdc3Q64519 Gm12241-201ENSMUST00000118330 726 ntBASIC12.15□□□□□ -0.46
Sdc3Q64519 Gm13342-201ENSMUST00000121055 207 ntBASIC12.15□□□□□ -0.46
Sdc3Q64519 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.15□□□□□ -0.46
Sdc3Q64519 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sdc3Q64519 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sdc3Q64519 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sdc3Q64519 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.15□□□□□ -0.46
Sdc3Q64519 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sdc3Q64519 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sdc3Q64519 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.15□□□□□ -0.46
Sdc3Q64519 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.15□□□□□ -0.46
Sdc3Q64519 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sdc3Q64519 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.15□□□□□ -0.46
Sdc3Q64519 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.15□□□□□ -0.46
Sdc3Q64519 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sdc3Q64519 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Sdc3Q64519 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sdc3Q64519 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sdc3Q64519 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sdc3Q64519 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Sdc3Q64519 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Sdc3Q64519 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sdc3Q64519 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.15□□□□□ -0.46
Sdc3Q64519 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sdc3Q64519 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sdc3Q64519 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sdc3Q64519 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sdc3Q64519 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sdc3Q64519 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sdc3Q64519 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sdc3Q64519 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Sdc3Q64519 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Sdc3Q64519 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Sdc3Q64519 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sdc3Q64519 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sdc3Q64519 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Sdc3Q64519 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sdc3Q64519 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sdc3Q64519 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sdc3Q64519 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sdc3Q64519 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sdc3Q64519 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Sdc3Q64519 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sdc3Q64519 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sdc3Q64519 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sdc3Q64519 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Sdc3Q64519 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Sdc3Q64519 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Sdc3Q64519 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Sdc3Q64519 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Sdc3Q64519 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Sdc3Q64519 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sdc3Q64519 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.14□□□□□ -0.47
Sdc3Q64519 Gm4986-201ENSMUST00000119731 549 ntBASIC12.14□□□□□ -0.47
Sdc3Q64519 Gm13350-201ENSMUST00000120519 479 ntBASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms