Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.56□□□□□ -0.08
Scn9aQ62205 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Scn9aQ62205 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Scn9aQ62205 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Scn9aQ62205 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn9aQ62205 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Scn9aQ62205 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn9aQ62205 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Scn9aQ62205 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn9aQ62205 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scn9aQ62205 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Scn9aQ62205 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Scn9aQ62205 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Scn9aQ62205 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scn9aQ62205 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Scn9aQ62205 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scn9aQ62205 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scn9aQ62205 Gm15566-201ENSMUST00000121130 590 ntBASIC14.55□□□□□ -0.08
Scn9aQ62205 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC14.55□□□□□ -0.08
Scn9aQ62205 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC14.55□□□□□ -0.08
Scn9aQ62205 AC169036.1-201ENSMUST00000227994 296 ntBASIC14.55□□□□□ -0.08
Scn9aQ62205 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
Scn9aQ62205 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Scn9aQ62205 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scn9aQ62205 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scn9aQ62205 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Scn9aQ62205 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scn9aQ62205 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC14.55□□□□□ -0.08
Scn9aQ62205 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Scn9aQ62205 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Scn9aQ62205 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scn9aQ62205 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Scn9aQ62205 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scn9aQ62205 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scn9aQ62205 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC14.54□□□□□ -0.08
Scn9aQ62205 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC14.54□□□□□ -0.08
Scn9aQ62205 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Scn9aQ62205 Gm9645-201ENSMUST00000197131 792 ntBASIC14.54□□□□□ -0.08
Scn9aQ62205 Gm42657-201ENSMUST00000201746 211 ntBASIC14.54□□□□□ -0.08
Scn9aQ62205 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC14.54□□□□□ -0.08
Scn9aQ62205 CT485606.1-201ENSMUST00000213187 878 ntBASIC14.54□□□□□ -0.08
Scn9aQ62205 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC14.54□□□□□ -0.08
Scn9aQ62205 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Scn9aQ62205 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Scn9aQ62205 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Scn9aQ62205 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Scn9aQ62205 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Scn9aQ62205 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC14.54□□□□□ -0.08
Scn9aQ62205 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Scn9aQ62205 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn9aQ62205 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn9aQ62205 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Scn9aQ62205 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Scn9aQ62205 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn9aQ62205 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn9aQ62205 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.54□□□□□ -0.08
Scn9aQ62205 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn9aQ62205 Gm37131-201ENSMUST00000192502 1561 ntBASIC14.54□□□□□ -0.08
Scn9aQ62205 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn9aQ62205 Gm14193-201ENSMUST00000105067 153 ntBASIC14.54□□□□□ -0.08
Scn9aQ62205 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn9aQ62205 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC14.54□□□□□ -0.08
Scn9aQ62205 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Scn9aQ62205 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn9aQ62205 Gm5621-201ENSMUST00000187303 640 ntBASIC14.54□□□□□ -0.08
Scn9aQ62205 Gm17877-201ENSMUST00000192578 814 ntBASIC14.54□□□□□ -0.08
Scn9aQ62205 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Scn9aQ62205 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Scn9aQ62205 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Scn9aQ62205 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn9aQ62205 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn9aQ62205 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn9aQ62205 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn9aQ62205 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Scn9aQ62205 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Scn9aQ62205 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn9aQ62205 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Scn9aQ62205 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn9aQ62205 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn9aQ62205 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn9aQ62205 Gm11663-201ENSMUST00000117888 290 ntBASIC14.53□□□□□ -0.08
Scn9aQ62205 Gm11422-201ENSMUST00000118925 1103 ntBASIC14.53□□□□□ -0.08
Scn9aQ62205 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC14.53□□□□□ -0.08
Scn9aQ62205 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC14.53□□□□□ -0.08
Scn9aQ62205 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Scn9aQ62205 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Scn9aQ62205 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn9aQ62205 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn9aQ62205 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Scn9aQ62205 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn9aQ62205 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn9aQ62205 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn9aQ62205 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.53□□□□□ -0.08
Scn9aQ62205 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn9aQ62205 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn9aQ62205 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC14.53□□□□□ -0.08
Scn9aQ62205 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Scn9aQ62205 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Scn9aQ62205 Gm22877-201ENSMUST00000175451 105 ntBASIC14.53□□□□□ -0.08
Scn9aQ62205 Gm29499-201ENSMUST00000189151 486 ntBASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 88.8 ms