Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ift88Q61371 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.93□□□□□ -0.18
Ift88Q61371 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ift88Q61371 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ift88Q61371 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ift88Q61371 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Ift88Q61371 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Ift88Q61371 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.93□□□□□ -0.18
Ift88Q61371 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ift88Q61371 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ift88Q61371 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ift88Q61371 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ift88Q61371 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Ift88Q61371 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ift88Q61371 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ift88Q61371 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ift88Q61371 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ift88Q61371 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Ift88Q61371 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ift88Q61371 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ift88Q61371 Gm43365-201ENSMUST00000196522 2106 ntBASIC13.93□□□□□ -0.18
Ift88Q61371 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ift88Q61371 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ift88Q61371 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ift88Q61371 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ift88Q61371 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ift88Q61371 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Ift88Q61371 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ift88Q61371 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Ift88Q61371 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ift88Q61371 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ift88Q61371 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ift88Q61371 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.92□□□□□ -0.18
Ift88Q61371 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ift88Q61371 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ift88Q61371 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
Ift88Q61371 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ift88Q61371 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ift88Q61371 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ift88Q61371 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ift88Q61371 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ift88Q61371 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Ift88Q61371 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Ift88Q61371 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Ift88Q61371 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.92□□□□□ -0.18
Ift88Q61371 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ift88Q61371 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.92□□□□□ -0.18
Ift88Q61371 Gm18018-201ENSMUST00000198273 408 ntBASIC13.92□□□□□ -0.18
Ift88Q61371 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.92□□□□□ -0.18
Ift88Q61371 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ift88Q61371 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ift88Q61371 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.92□□□□□ -0.18
Ift88Q61371 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ift88Q61371 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ift88Q61371 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ift88Q61371 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Ift88Q61371 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ift88Q61371 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Ift88Q61371 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Ift88Q61371 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ift88Q61371 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ift88Q61371 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
Ift88Q61371 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.92□□□□□ -0.18
Ift88Q61371 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ift88Q61371 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ift88Q61371 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Ift88Q61371 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ift88Q61371 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ift88Q61371 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC13.91□□□□□ -0.18
Ift88Q61371 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ift88Q61371 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.91□□□□□ -0.18
Ift88Q61371 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Ift88Q61371 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ift88Q61371 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Ift88Q61371 Gm15703-201ENSMUST00000120250 880 ntBASIC13.91□□□□□ -0.18
Ift88Q61371 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.91□□□□□ -0.18
Ift88Q61371 Gm2231-201ENSMUST00000125661 612 ntBASIC13.91□□□□□ -0.18
Ift88Q61371 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Ift88Q61371 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ift88Q61371 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ift88Q61371 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.91□□□□□ -0.18
Ift88Q61371 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Ift88Q61371 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.91□□□□□ -0.18
Ift88Q61371 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.91□□□□□ -0.18
Ift88Q61371 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.91□□□□□ -0.18
Ift88Q61371 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.91□□□□□ -0.18
Ift88Q61371 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.91□□□□□ -0.18
Ift88Q61371 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.91□□□□□ -0.18
Ift88Q61371 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ift88Q61371 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ift88Q61371 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.91□□□□□ -0.18
Ift88Q61371 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.91□□□□□ -0.18
Ift88Q61371 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ift88Q61371 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ift88Q61371 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ift88Q61371 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ift88Q61371 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ift88Q61371 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ift88Q61371 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC13.91□□□□□ -0.18
Ift88Q61371 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms