Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.12□□□□□ -0.47
ClpbQ60649 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClpbQ60649 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClpbQ60649 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ClpbQ60649 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClpbQ60649 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
ClpbQ60649 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClpbQ60649 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
ClpbQ60649 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClpbQ60649 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.12□□□□□ -0.47
ClpbQ60649 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.11□□□□□ -0.47
ClpbQ60649 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClpbQ60649 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ClpbQ60649 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClpbQ60649 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ClpbQ60649 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ClpbQ60649 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.11□□□□□ -0.47
ClpbQ60649 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClpbQ60649 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.11□□□□□ -0.47
ClpbQ60649 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClpbQ60649 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClpbQ60649 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClpbQ60649 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClpbQ60649 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClpbQ60649 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ClpbQ60649 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClpbQ60649 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ClpbQ60649 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.11□□□□□ -0.47
ClpbQ60649 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.11□□□□□ -0.47
ClpbQ60649 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ClpbQ60649 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.11□□□□□ -0.47
ClpbQ60649 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.11□□□□□ -0.47
ClpbQ60649 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.11□□□□□ -0.47
ClpbQ60649 Gm17208-201ENSMUST00000168388 535 ntBASIC12.11□□□□□ -0.47
ClpbQ60649 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.11□□□□□ -0.47
ClpbQ60649 Gm38002-201ENSMUST00000193255 180 ntBASIC12.11□□□□□ -0.47
ClpbQ60649 Gm42627-201ENSMUST00000197347 224 ntBASIC12.11□□□□□ -0.47
ClpbQ60649 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.11□□□□□ -0.47
ClpbQ60649 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.11□□□□□ -0.47
ClpbQ60649 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.11□□□□□ -0.47
ClpbQ60649 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.11□□□□□ -0.47
ClpbQ60649 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.11□□□□□ -0.47
ClpbQ60649 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.11□□□□□ -0.47
ClpbQ60649 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.11□□□□□ -0.47
ClpbQ60649 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.11□□□□□ -0.47
ClpbQ60649 Gm7399-201ENSMUST00000032395 858 ntBASIC12.11□□□□□ -0.47
ClpbQ60649 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.11□□□□□ -0.47
ClpbQ60649 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
ClpbQ60649 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
ClpbQ60649 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
ClpbQ60649 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.11□□□□□ -0.47
ClpbQ60649 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ClpbQ60649 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClpbQ60649 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClpbQ60649 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClpbQ60649 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.11□□□□□ -0.47
ClpbQ60649 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClpbQ60649 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.11□□□□□ -0.47
ClpbQ60649 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClpbQ60649 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ClpbQ60649 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClpbQ60649 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClpbQ60649 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
ClpbQ60649 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
ClpbQ60649 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClpbQ60649 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
ClpbQ60649 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.11□□□□□ -0.47
ClpbQ60649 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClpbQ60649 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClpbQ60649 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClpbQ60649 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClpbQ60649 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.1□□□□□ -0.47
ClpbQ60649 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.1□□□□□ -0.47
ClpbQ60649 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.1□□□□□ -0.47
ClpbQ60649 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClpbQ60649 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.1□□□□□ -0.47
ClpbQ60649 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClpbQ60649 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClpbQ60649 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClpbQ60649 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClpbQ60649 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClpbQ60649 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClpbQ60649 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ClpbQ60649 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClpbQ60649 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.1□□□□□ -0.47
ClpbQ60649 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.1□□□□□ -0.47
ClpbQ60649 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
ClpbQ60649 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.1□□□□□ -0.47
ClpbQ60649 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
ClpbQ60649 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.1□□□□□ -0.47
ClpbQ60649 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
ClpbQ60649 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.1□□□□□ -0.47
ClpbQ60649 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ClpbQ60649 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.1□□□□□ -0.47
ClpbQ60649 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClpbQ60649 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
ClpbQ60649 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.1□□□□□ -0.47
ClpbQ60649 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.1□□□□□ -0.47
ClpbQ60649 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ClpbQ60649 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms