Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.04□□□□□ -0.48
Nr1h4Q60641 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nr1h4Q60641 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Nr1h4Q60641 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nr1h4Q60641 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nr1h4Q60641 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.03□□□□□ -0.48
Nr1h4Q60641 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nr1h4Q60641 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nr1h4Q60641 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nr1h4Q60641 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Nr1h4Q60641 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nr1h4Q60641 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Nr1h4Q60641 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nr1h4Q60641 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nr1h4Q60641 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.03□□□□□ -0.48
Nr1h4Q60641 Gm6152-201ENSMUST00000151704 340 ntBASIC12.03□□□□□ -0.48
Nr1h4Q60641 Mir7654-201ENSMUST00000185082 70 ntBASIC12.03□□□□□ -0.48
Nr1h4Q60641 Gm28693-202ENSMUST00000190758 331 ntBASIC12.03□□□□□ -0.48
Nr1h4Q60641 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.03□□□□□ -0.48
Nr1h4Q60641 Gm18473-201ENSMUST00000220543 868 ntBASIC12.03□□□□□ -0.48
Nr1h4Q60641 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.03□□□□□ -0.48
Nr1h4Q60641 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.03□□□□□ -0.48
Nr1h4Q60641 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nr1h4Q60641 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nr1h4Q60641 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.03□□□□□ -0.48
Nr1h4Q60641 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nr1h4Q60641 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.03□□□□□ -0.48
Nr1h4Q60641 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.03□□□□□ -0.48
Nr1h4Q60641 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Nr1h4Q60641 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nr1h4Q60641 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nr1h4Q60641 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Nr1h4Q60641 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nr1h4Q60641 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.02□□□□□ -0.48
Nr1h4Q60641 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nr1h4Q60641 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nr1h4Q60641 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.02□□□□□ -0.48
Nr1h4Q60641 AC127597.1-201ENSMUST00000225697 5711 ntBASIC12.02□□□□□ -0.48
Nr1h4Q60641 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.02□□□□□ -0.49
Nr1h4Q60641 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nr1h4Q60641 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Nr1h4Q60641 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Nr1h4Q60641 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nr1h4Q60641 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nr1h4Q60641 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nr1h4Q60641 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nr1h4Q60641 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nr1h4Q60641 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nr1h4Q60641 Gm15429-201ENSMUST00000151268 798 ntBASIC12.02□□□□□ -0.49
Nr1h4Q60641 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Nr1h4Q60641 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nr1h4Q60641 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Nr1h4Q60641 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Nr1h4Q60641 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.02□□□□□ -0.49
Nr1h4Q60641 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.02□□□□□ -0.49
Nr1h4Q60641 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.02□□□□□ -0.49
Nr1h4Q60641 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.02□□□□□ -0.49
Nr1h4Q60641 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.02□□□□□ -0.49
Nr1h4Q60641 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nr1h4Q60641 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nr1h4Q60641 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nr1h4Q60641 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nr1h4Q60641 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nr1h4Q60641 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nr1h4Q60641 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nr1h4Q60641 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nr1h4Q60641 Matn2-203ENSMUST00000226766 3252 ntBASIC12.02□□□□□ -0.49
Nr1h4Q60641 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nr1h4Q60641 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nr1h4Q60641 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.02□□□□□ -0.49
Nr1h4Q60641 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nr1h4Q60641 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nr1h4Q60641 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nr1h4Q60641 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nr1h4Q60641 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nr1h4Q60641 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nr1h4Q60641 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nr1h4Q60641 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nr1h4Q60641 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nr1h4Q60641 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nr1h4Q60641 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nr1h4Q60641 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.01□□□□□ -0.49
Nr1h4Q60641 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nr1h4Q60641 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Nr1h4Q60641 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nr1h4Q60641 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Nr1h4Q60641 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nr1h4Q60641 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nr1h4Q60641 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.01□□□□□ -0.49
Nr1h4Q60641 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.01□□□□□ -0.49
Nr1h4Q60641 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nr1h4Q60641 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.01□□□□□ -0.49
Nr1h4Q60641 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nr1h4Q60641 Mir7023-201ENSMUST00000185093 64 ntBASIC12.01□□□□□ -0.49
Nr1h4Q60641 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nr1h4Q60641 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Nr1h4Q60641 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Nr1h4Q60641 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nr1h4Q60641 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.01□□□□□ -0.49
Nr1h4Q60641 Mir339-201ENSMUST00000083659 96 ntBASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms