Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.47□□□□□ -0.41
Scn2bQ56A07 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Scn2bQ56A07 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn2bQ56A07 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Scn2bQ56A07 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Scn2bQ56A07 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn2bQ56A07 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn2bQ56A07 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn2bQ56A07 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Scn2bQ56A07 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn2bQ56A07 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn2bQ56A07 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn2bQ56A07 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Scn2bQ56A07 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Scn2bQ56A07 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.47□□□□□ -0.41
Scn2bQ56A07 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn2bQ56A07 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Scn2bQ56A07 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn2bQ56A07 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn2bQ56A07 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn2bQ56A07 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn2bQ56A07 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn2bQ56A07 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.47□□□□□ -0.41
Scn2bQ56A07 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.47□□□□□ -0.41
Scn2bQ56A07 Gm14760-201ENSMUST00000121831 999 ntBASIC12.47□□□□□ -0.41
Scn2bQ56A07 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.47□□□□□ -0.41
Scn2bQ56A07 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Scn2bQ56A07 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.47□□□□□ -0.41
Scn2bQ56A07 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Scn2bQ56A07 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn2bQ56A07 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Scn2bQ56A07 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Scn2bQ56A07 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.47□□□□□ -0.41
Scn2bQ56A07 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn2bQ56A07 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.47□□□□□ -0.41
Scn2bQ56A07 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Scn2bQ56A07 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn2bQ56A07 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.47□□□□□ -0.41
Scn2bQ56A07 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn2bQ56A07 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn2bQ56A07 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Scn2bQ56A07 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn2bQ56A07 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Scn2bQ56A07 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn2bQ56A07 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.46□□□□□ -0.41
Scn2bQ56A07 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Scn2bQ56A07 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn2bQ56A07 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.46□□□□□ -0.41
Scn2bQ56A07 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.46□□□□□ -0.41
Scn2bQ56A07 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Scn2bQ56A07 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Scn2bQ56A07 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn2bQ56A07 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.46□□□□□ -0.41
Scn2bQ56A07 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.46□□□□□ -0.41
Scn2bQ56A07 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn2bQ56A07 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.46□□□□□ -0.41
Scn2bQ56A07 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn2bQ56A07 Snord83b-201ENSMUST00000104546 94 ntBASIC12.46□□□□□ -0.41
Scn2bQ56A07 Gm8213-201ENSMUST00000118191 441 ntBASIC12.46□□□□□ -0.41
Scn2bQ56A07 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn2bQ56A07 Gm13829-201ENSMUST00000119600 138 ntBASIC12.46□□□□□ -0.41
Scn2bQ56A07 Gm10156-201ENSMUST00000122364 462 ntBASIC12.46□□□□□ -0.41
Scn2bQ56A07 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Scn2bQ56A07 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.46□□□□□ -0.41
Scn2bQ56A07 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.46□□□□□ -0.41
Scn2bQ56A07 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.46□□□□□ -0.41
Scn2bQ56A07 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.46□□□□□ -0.41
Scn2bQ56A07 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.46□□□□□ -0.41
Scn2bQ56A07 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.46□□□□□ -0.41
Scn2bQ56A07 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.46□□□□□ -0.41
Scn2bQ56A07 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn2bQ56A07 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn2bQ56A07 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn2bQ56A07 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Scn2bQ56A07 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn2bQ56A07 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Scn2bQ56A07 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Scn2bQ56A07 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Scn2bQ56A07 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Scn2bQ56A07 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Scn2bQ56A07 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Scn2bQ56A07 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Scn2bQ56A07 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Scn2bQ56A07 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.46□□□□□ -0.42
Scn2bQ56A07 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Scn2bQ56A07 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Scn2bQ56A07 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.42
Scn2bQ56A07 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Scn2bQ56A07 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Scn2bQ56A07 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Scn2bQ56A07 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn2bQ56A07 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn2bQ56A07 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.45□□□□□ -0.42
Scn2bQ56A07 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.45□□□□□ -0.42
Scn2bQ56A07 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn2bQ56A07 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn2bQ56A07 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn2bQ56A07 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Scn2bQ56A07 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn2bQ56A07 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms