Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim40Q3UWA4 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.83□□□□□ -0.52
Trim40Q3UWA4 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.83□□□□□ -0.52
Trim40Q3UWA4 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC11.83□□□□□ -0.52
Trim40Q3UWA4 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Trim40Q3UWA4 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC11.83□□□□□ -0.52
Trim40Q3UWA4 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim40Q3UWA4 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trim40Q3UWA4 Gm27306-201ENSMUST00000183970 107 ntBASIC11.83□□□□□ -0.52
Trim40Q3UWA4 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC11.83□□□□□ -0.52
Trim40Q3UWA4 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim40Q3UWA4 Gm43094-201ENSMUST00000196549 921 ntBASIC11.83□□□□□ -0.52
Trim40Q3UWA4 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC11.83□□□□□ -0.52
Trim40Q3UWA4 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.83□□□□□ -0.52
Trim40Q3UWA4 Gm8227-201ENSMUST00000223306 571 ntBASIC11.83□□□□□ -0.52
Trim40Q3UWA4 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim40Q3UWA4 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim40Q3UWA4 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trim40Q3UWA4 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trim40Q3UWA4 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim40Q3UWA4 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim40Q3UWA4 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trim40Q3UWA4 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim40Q3UWA4 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.83□□□□□ -0.52
Trim40Q3UWA4 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trim40Q3UWA4 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.83□□□□□ -0.52
Trim40Q3UWA4 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim40Q3UWA4 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim40Q3UWA4 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim40Q3UWA4 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim40Q3UWA4 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trim40Q3UWA4 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.83□□□□□ -0.52
Trim40Q3UWA4 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim40Q3UWA4 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim40Q3UWA4 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trim40Q3UWA4 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim40Q3UWA4 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim40Q3UWA4 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim40Q3UWA4 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim40Q3UWA4 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim40Q3UWA4 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim40Q3UWA4 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trim40Q3UWA4 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim40Q3UWA4 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim40Q3UWA4 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim40Q3UWA4 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim40Q3UWA4 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim40Q3UWA4 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.82□□□□□ -0.52
Trim40Q3UWA4 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC11.82□□□□□ -0.52
Trim40Q3UWA4 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC11.82□□□□□ -0.52
Trim40Q3UWA4 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trim40Q3UWA4 Gm27989-201ENSMUST00000184721 107 ntBASIC11.82□□□□□ -0.52
Trim40Q3UWA4 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim40Q3UWA4 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC11.82□□□□□ -0.52
Trim40Q3UWA4 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim40Q3UWA4 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim40Q3UWA4 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim40Q3UWA4 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim40Q3UWA4 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim40Q3UWA4 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim40Q3UWA4 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim40Q3UWA4 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim40Q3UWA4 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.82□□□□□ -0.52
Trim40Q3UWA4 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Trim40Q3UWA4 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trim40Q3UWA4 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim40Q3UWA4 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.82□□□□□ -0.52
Trim40Q3UWA4 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim40Q3UWA4 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim40Q3UWA4 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim40Q3UWA4 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim40Q3UWA4 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim40Q3UWA4 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim40Q3UWA4 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trim40Q3UWA4 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim40Q3UWA4 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim40Q3UWA4 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trim40Q3UWA4 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trim40Q3UWA4 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim40Q3UWA4 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trim40Q3UWA4 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim40Q3UWA4 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim40Q3UWA4 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim40Q3UWA4 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trim40Q3UWA4 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim40Q3UWA4 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.81□□□□□ -0.52
Trim40Q3UWA4 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim40Q3UWA4 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim40Q3UWA4 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim40Q3UWA4 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim40Q3UWA4 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trim40Q3UWA4 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim40Q3UWA4 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim40Q3UWA4 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Trim40Q3UWA4 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC11.81□□□□□ -0.52
Trim40Q3UWA4 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC11.81□□□□□ -0.52
Trim40Q3UWA4 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.81□□□□□ -0.52
Trim40Q3UWA4 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim40Q3UWA4 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim40Q3UWA4 Gm5279-201ENSMUST00000199575 745 ntBASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms