Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Arhgef40Q3UPH7 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC18.2■□□□□ 0.5
Arhgef40Q3UPH7 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Arhgef40Q3UPH7 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Arhgef40Q3UPH7 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC18.2■□□□□ 0.5
Arhgef40Q3UPH7 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Arhgef40Q3UPH7 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Arhgef40Q3UPH7 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Arhgef40Q3UPH7 Gm44260-201ENSMUST00000204946 2094 ntBASIC18.2■□□□□ 0.5
Arhgef40Q3UPH7 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Arhgef40Q3UPH7 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC18.2■□□□□ 0.5
Arhgef40Q3UPH7 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC18.2■□□□□ 0.5
Arhgef40Q3UPH7 Gm25072-201ENSMUST00000175233 235 ntBASIC18.2■□□□□ 0.5
Arhgef40Q3UPH7 Gm23153-201ENSMUST00000175323 313 ntBASIC18.2■□□□□ 0.5
Arhgef40Q3UPH7 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Arhgef40Q3UPH7 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
Arhgef40Q3UPH7 Gm45398-201ENSMUST00000210561 165 ntBASIC18.2■□□□□ 0.5
Arhgef40Q3UPH7 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Arhgef40Q3UPH7 AC171241.1-201ENSMUST00000228144 1166 ntBASIC18.2■□□□□ 0.5
Arhgef40Q3UPH7 Snora73b-201ENSMUST00000083419 205 ntBASIC18.2■□□□□ 0.5
Arhgef40Q3UPH7 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Arhgef40Q3UPH7 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Arhgef40Q3UPH7 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Arhgef40Q3UPH7 AC154262.2-202ENSMUST00000225158 1331 ntBASIC18.2■□□□□ 0.5
Arhgef40Q3UPH7 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Arhgef40Q3UPH7 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Arhgef40Q3UPH7 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Arhgef40Q3UPH7 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC18.2■□□□□ 0.5
Arhgef40Q3UPH7 Gm9129-201ENSMUST00000218173 1689 ntBASIC18.19■□□□□ 0.5
Arhgef40Q3UPH7 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Arhgef40Q3UPH7 Gm24891-201ENSMUST00000104391 136 ntBASIC18.19■□□□□ 0.5
Arhgef40Q3UPH7 Gm8731-201ENSMUST00000118088 412 ntBASIC18.19■□□□□ 0.5
Arhgef40Q3UPH7 Mir1901-201ENSMUST00000122616 78 ntBASIC18.19■□□□□ 0.5
Arhgef40Q3UPH7 Gm25545-201ENSMUST00000122673 323 ntBASIC18.19■□□□□ 0.5
Arhgef40Q3UPH7 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC18.19■□□□□ 0.5
Arhgef40Q3UPH7 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC18.19■□□□□ 0.5
Arhgef40Q3UPH7 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Arhgef40Q3UPH7 Gm4310-201ENSMUST00000177847 889 ntBASIC18.19■□□□□ 0.5
Arhgef40Q3UPH7 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC18.19■□□□□ 0.5
Arhgef40Q3UPH7 Gm43520-201ENSMUST00000197996 164 ntBASIC18.19■□□□□ 0.5
Arhgef40Q3UPH7 Gm17831-201ENSMUST00000205579 900 ntBASIC18.19■□□□□ 0.5
Arhgef40Q3UPH7 Gm17931-201ENSMUST00000208132 634 ntBASIC18.19■□□□□ 0.5
Arhgef40Q3UPH7 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Arhgef40Q3UPH7 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC18.19■□□□□ 0.5
Arhgef40Q3UPH7 Gm45575-201ENSMUST00000210283 548 ntBASIC18.19■□□□□ 0.5
Arhgef40Q3UPH7 AC121960.1-201ENSMUST00000227982 564 ntBASIC18.19■□□□□ 0.5
Arhgef40Q3UPH7 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Arhgef40Q3UPH7 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Arhgef40Q3UPH7 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC18.19■□□□□ 0.5
Arhgef40Q3UPH7 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Arhgef40Q3UPH7 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Arhgef40Q3UPH7 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Arhgef40Q3UPH7 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Arhgef40Q3UPH7 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC18.19■□□□□ 0.5
Arhgef40Q3UPH7 Gm18782-201ENSMUST00000209023 1399 ntBASIC18.19■□□□□ 0.5
Arhgef40Q3UPH7 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Arhgef40Q3UPH7 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Arhgef40Q3UPH7 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Arhgef40Q3UPH7 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Arhgef40Q3UPH7 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Arhgef40Q3UPH7 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Arhgef40Q3UPH7 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Arhgef40Q3UPH7 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Arhgef40Q3UPH7 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Arhgef40Q3UPH7 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Arhgef40Q3UPH7 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Arhgef40Q3UPH7 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Arhgef40Q3UPH7 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Arhgef40Q3UPH7 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Arhgef40Q3UPH7 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Arhgef40Q3UPH7 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
Arhgef40Q3UPH7 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC18.18■□□□□ 0.5
Arhgef40Q3UPH7 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC18.18■□□□□ 0.5
Arhgef40Q3UPH7 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC18.18■□□□□ 0.5
Arhgef40Q3UPH7 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC18.18■□□□□ 0.5
Arhgef40Q3UPH7 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC18.18■□□□□ 0.5
Arhgef40Q3UPH7 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Arhgef40Q3UPH7 Gm44882-201ENSMUST00000205702 802 ntBASIC18.18■□□□□ 0.5
Arhgef40Q3UPH7 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Arhgef40Q3UPH7 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Arhgef40Q3UPH7 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Arhgef40Q3UPH7 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Arhgef40Q3UPH7 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Arhgef40Q3UPH7 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Arhgef40Q3UPH7 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Arhgef40Q3UPH7 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Arhgef40Q3UPH7 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Arhgef40Q3UPH7 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Arhgef40Q3UPH7 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Arhgef40Q3UPH7 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Arhgef40Q3UPH7 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Arhgef40Q3UPH7 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Arhgef40Q3UPH7 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Arhgef40Q3UPH7 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Arhgef40Q3UPH7 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Arhgef40Q3UPH7 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Arhgef40Q3UPH7 Gm22711-201ENSMUST00000116890 133 ntBASIC18.18■□□□□ 0.5
Arhgef40Q3UPH7 Gm13263-201ENSMUST00000121271 838 ntBASIC18.18■□□□□ 0.5
Arhgef40Q3UPH7 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC18.18■□□□□ 0.5
Arhgef40Q3UPH7 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms