Protein–RNA interactions for Protein: Q3TYP4

Tmem88b, Transmembrane protein 88B, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem88bQ3TYP4 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tmem88bQ3TYP4 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Tmem88bQ3TYP4 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tmem88bQ3TYP4 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tmem88bQ3TYP4 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Tmem88bQ3TYP4 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Tmem88bQ3TYP4 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tmem88bQ3TYP4 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tmem88bQ3TYP4 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Tmem88bQ3TYP4 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tmem88bQ3TYP4 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC10.54□□□□□ -0.72
Tmem88bQ3TYP4 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Tmem88bQ3TYP4 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tmem88bQ3TYP4 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tmem88bQ3TYP4 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tmem88bQ3TYP4 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC10.54□□□□□ -0.72
Tmem88bQ3TYP4 Gm9062-201ENSMUST00000117712 727 ntBASIC10.54□□□□□ -0.72
Tmem88bQ3TYP4 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tmem88bQ3TYP4 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC10.54□□□□□ -0.72
Tmem88bQ3TYP4 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC10.54□□□□□ -0.72
Tmem88bQ3TYP4 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tmem88bQ3TYP4 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Tmem88bQ3TYP4 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Tmem88bQ3TYP4 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC10.54□□□□□ -0.72
Tmem88bQ3TYP4 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Tmem88bQ3TYP4 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC10.54□□□□□ -0.72
Tmem88bQ3TYP4 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC10.54□□□□□ -0.72
Tmem88bQ3TYP4 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tmem88bQ3TYP4 Gm45495-201ENSMUST00000200940 1700 ntBASIC10.54□□□□□ -0.72
Tmem88bQ3TYP4 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tmem88bQ3TYP4 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Tmem88bQ3TYP4 Spcs1-203ENSMUST00000226374 592 ntBASIC10.54□□□□□ -0.72
Tmem88bQ3TYP4 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tmem88bQ3TYP4 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tmem88bQ3TYP4 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tmem88bQ3TYP4 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Tmem88bQ3TYP4 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tmem88bQ3TYP4 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Tmem88bQ3TYP4 Gm3287-205ENSMUST00000228893 1332 ntBASIC10.54□□□□□ -0.72
Tmem88bQ3TYP4 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tmem88bQ3TYP4 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tmem88bQ3TYP4 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tmem88bQ3TYP4 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tmem88bQ3TYP4 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Tmem88bQ3TYP4 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tmem88bQ3TYP4 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tmem88bQ3TYP4 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tmem88bQ3TYP4 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tmem88bQ3TYP4 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Tmem88bQ3TYP4 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Tmem88bQ3TYP4 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tmem88bQ3TYP4 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tmem88bQ3TYP4 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tmem88bQ3TYP4 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Tmem88bQ3TYP4 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Tmem88bQ3TYP4 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tmem88bQ3TYP4 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Tmem88bQ3TYP4 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tmem88bQ3TYP4 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tmem88bQ3TYP4 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Tmem88bQ3TYP4 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tmem88bQ3TYP4 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tmem88bQ3TYP4 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Tmem88bQ3TYP4 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC10.53□□□□□ -0.72
Tmem88bQ3TYP4 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tmem88bQ3TYP4 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Tmem88bQ3TYP4 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC10.53□□□□□ -0.72
Tmem88bQ3TYP4 Gm14665-201ENSMUST00000122294 557 ntBASIC10.53□□□□□ -0.72
Tmem88bQ3TYP4 n-R5s14-201ENSMUST00000122688 107 ntBASIC10.53□□□□□ -0.72
Tmem88bQ3TYP4 Gm9061-201ENSMUST00000182707 1006 ntBASIC10.53□□□□□ -0.72
Tmem88bQ3TYP4 Gm9211-201ENSMUST00000182882 975 ntBASIC10.53□□□□□ -0.72
Tmem88bQ3TYP4 Gm44136-201ENSMUST00000203819 1106 ntBASIC10.53□□□□□ -0.72
Tmem88bQ3TYP4 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Tmem88bQ3TYP4 Gm8913-201ENSMUST00000209491 641 ntBASIC10.53□□□□□ -0.72
Tmem88bQ3TYP4 AC107638.1-201ENSMUST00000213690 1061 ntBASIC10.53□□□□□ -0.72
Tmem88bQ3TYP4 AC131330.1-201ENSMUST00000227814 1015 ntBASIC10.53□□□□□ -0.72
Tmem88bQ3TYP4 Gm6992-201ENSMUST00000217973 1607 ntBASIC10.53□□□□□ -0.72
Tmem88bQ3TYP4 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tmem88bQ3TYP4 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tmem88bQ3TYP4 Gm4864-201ENSMUST00000219894 1461 ntBASIC10.53□□□□□ -0.72
Tmem88bQ3TYP4 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tmem88bQ3TYP4 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tmem88bQ3TYP4 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Tmem88bQ3TYP4 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Tmem88bQ3TYP4 Gm37827-201ENSMUST00000194486 1542 ntBASIC10.53□□□□□ -0.72
Tmem88bQ3TYP4 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tmem88bQ3TYP4 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Tmem88bQ3TYP4 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tmem88bQ3TYP4 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC10.53□□□□□ -0.72
Tmem88bQ3TYP4 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tmem88bQ3TYP4 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tmem88bQ3TYP4 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tmem88bQ3TYP4 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Tmem88bQ3TYP4 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC10.52□□□□□ -0.72
Tmem88bQ3TYP4 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.72
Tmem88bQ3TYP4 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Tmem88bQ3TYP4 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Tmem88bQ3TYP4 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.72
Tmem88bQ3TYP4 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Tmem88bQ3TYP4 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms