Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nhej1Q3KNJ2 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nhej1Q3KNJ2 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nhej1Q3KNJ2 Gm43365-201ENSMUST00000196522 2106 ntBASIC13.43□□□□□ -0.26
Nhej1Q3KNJ2 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nhej1Q3KNJ2 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nhej1Q3KNJ2 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nhej1Q3KNJ2 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Nhej1Q3KNJ2 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.42□□□□□ -0.26
Nhej1Q3KNJ2 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nhej1Q3KNJ2 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Nhej1Q3KNJ2 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Nhej1Q3KNJ2 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nhej1Q3KNJ2 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC13.42□□□□□ -0.26
Nhej1Q3KNJ2 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nhej1Q3KNJ2 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Nhej1Q3KNJ2 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nhej1Q3KNJ2 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC13.42□□□□□ -0.26
Nhej1Q3KNJ2 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nhej1Q3KNJ2 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nhej1Q3KNJ2 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nhej1Q3KNJ2 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nhej1Q3KNJ2 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nhej1Q3KNJ2 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nhej1Q3KNJ2 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nhej1Q3KNJ2 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Nhej1Q3KNJ2 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Nhej1Q3KNJ2 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Nhej1Q3KNJ2 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.42□□□□□ -0.26
Nhej1Q3KNJ2 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nhej1Q3KNJ2 Gm16479-201ENSMUST00000121706 932 ntBASIC13.42□□□□□ -0.26
Nhej1Q3KNJ2 Gm2231-201ENSMUST00000125661 612 ntBASIC13.42□□□□□ -0.26
Nhej1Q3KNJ2 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Nhej1Q3KNJ2 Gm26185-201ENSMUST00000157692 266 ntBASIC13.42□□□□□ -0.26
Nhej1Q3KNJ2 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Nhej1Q3KNJ2 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nhej1Q3KNJ2 Gm37042-201ENSMUST00000193816 581 ntBASIC13.42□□□□□ -0.26
Nhej1Q3KNJ2 Gm7287-201ENSMUST00000205267 602 ntBASIC13.42□□□□□ -0.26
Nhej1Q3KNJ2 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nhej1Q3KNJ2 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.42□□□□□ -0.26
Nhej1Q3KNJ2 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nhej1Q3KNJ2 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nhej1Q3KNJ2 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.42□□□□□ -0.26
Nhej1Q3KNJ2 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Nhej1Q3KNJ2 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nhej1Q3KNJ2 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.42□□□□□ -0.26
Nhej1Q3KNJ2 Gm37105-201ENSMUST00000192251 2085 ntBASIC13.42□□□□□ -0.26
Nhej1Q3KNJ2 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nhej1Q3KNJ2 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nhej1Q3KNJ2 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nhej1Q3KNJ2 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nhej1Q3KNJ2 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nhej1Q3KNJ2 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nhej1Q3KNJ2 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nhej1Q3KNJ2 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nhej1Q3KNJ2 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Nhej1Q3KNJ2 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nhej1Q3KNJ2 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nhej1Q3KNJ2 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nhej1Q3KNJ2 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.41□□□□□ -0.26
Nhej1Q3KNJ2 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nhej1Q3KNJ2 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nhej1Q3KNJ2 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nhej1Q3KNJ2 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nhej1Q3KNJ2 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nhej1Q3KNJ2 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Nhej1Q3KNJ2 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.41□□□□□ -0.26
Nhej1Q3KNJ2 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nhej1Q3KNJ2 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nhej1Q3KNJ2 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nhej1Q3KNJ2 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
Nhej1Q3KNJ2 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nhej1Q3KNJ2 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.41□□□□□ -0.26
Nhej1Q3KNJ2 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.41□□□□□ -0.26
Nhej1Q3KNJ2 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Nhej1Q3KNJ2 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nhej1Q3KNJ2 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Nhej1Q3KNJ2 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.41□□□□□ -0.26
Nhej1Q3KNJ2 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nhej1Q3KNJ2 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nhej1Q3KNJ2 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nhej1Q3KNJ2 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.41□□□□□ -0.26
Nhej1Q3KNJ2 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Nhej1Q3KNJ2 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC13.41□□□□□ -0.26
Nhej1Q3KNJ2 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Nhej1Q3KNJ2 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nhej1Q3KNJ2 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nhej1Q3KNJ2 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.26
Nhej1Q3KNJ2 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nhej1Q3KNJ2 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nhej1Q3KNJ2 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Nhej1Q3KNJ2 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC13.41□□□□□ -0.26
Nhej1Q3KNJ2 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nhej1Q3KNJ2 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Nhej1Q3KNJ2 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nhej1Q3KNJ2 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nhej1Q3KNJ2 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.4□□□□□ -0.26
Nhej1Q3KNJ2 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nhej1Q3KNJ2 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nhej1Q3KNJ2 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms