Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Thbs3Q05895 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Thbs3Q05895 Gm14127-201ENSMUST00000117906 678 ntBASIC11.09□□□□□ -0.63
Thbs3Q05895 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.09□□□□□ -0.63
Thbs3Q05895 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Thbs3Q05895 Gm24548-201ENSMUST00000158650 108 ntBASIC11.09□□□□□ -0.63
Thbs3Q05895 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Thbs3Q05895 AY702102-202ENSMUST00000194651 1173 ntBASIC11.09□□□□□ -0.63
Thbs3Q05895 Gm45930-201ENSMUST00000221330 292 ntBASIC11.09□□□□□ -0.63
Thbs3Q05895 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.09□□□□□ -0.63
Thbs3Q05895 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Thbs3Q05895 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Thbs3Q05895 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Thbs3Q05895 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.09□□□□□ -0.63
Thbs3Q05895 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Thbs3Q05895 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Thbs3Q05895 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Thbs3Q05895 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Thbs3Q05895 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Thbs3Q05895 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Thbs3Q05895 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.09□□□□□ -0.63
Thbs3Q05895 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
Thbs3Q05895 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
Thbs3Q05895 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.08□□□□□ -0.64
Thbs3Q05895 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Thbs3Q05895 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Thbs3Q05895 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Thbs3Q05895 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
Thbs3Q05895 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Thbs3Q05895 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Thbs3Q05895 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Thbs3Q05895 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.08□□□□□ -0.64
Thbs3Q05895 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Thbs3Q05895 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Thbs3Q05895 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Thbs3Q05895 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Thbs3Q05895 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Thbs3Q05895 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Thbs3Q05895 Gm11964-201ENSMUST00000120982 444 ntBASIC11.08□□□□□ -0.64
Thbs3Q05895 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.08□□□□□ -0.64
Thbs3Q05895 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.08□□□□□ -0.64
Thbs3Q05895 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.08□□□□□ -0.64
Thbs3Q05895 Rmrp-201ENSMUST00000157463 271 ntBASIC11.08□□□□□ -0.64
Thbs3Q05895 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.08□□□□□ -0.64
Thbs3Q05895 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Thbs3Q05895 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Thbs3Q05895 Gm37424-201ENSMUST00000191727 561 ntBASIC11.08□□□□□ -0.64
Thbs3Q05895 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.08□□□□□ -0.64
Thbs3Q05895 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Thbs3Q05895 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Thbs3Q05895 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.08□□□□□ -0.64
Thbs3Q05895 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.08□□□□□ -0.64
Thbs3Q05895 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.08□□□□□ -0.64
Thbs3Q05895 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.08□□□□□ -0.64
Thbs3Q05895 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.08□□□□□ -0.64
Thbs3Q05895 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.08□□□□□ -0.64
Thbs3Q05895 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Thbs3Q05895 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Thbs3Q05895 Gm22058-201ENSMUST00000083393 310 ntBASIC11.08□□□□□ -0.64
Thbs3Q05895 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Thbs3Q05895 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Thbs3Q05895 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Thbs3Q05895 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Thbs3Q05895 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Thbs3Q05895 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.08□□□□□ -0.64
Thbs3Q05895 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.08□□□□□ -0.64
Thbs3Q05895 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Thbs3Q05895 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Thbs3Q05895 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Thbs3Q05895 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Thbs3Q05895 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Thbs3Q05895 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Thbs3Q05895 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Thbs3Q05895 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.08□□□□□ -0.64
Thbs3Q05895 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Thbs3Q05895 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Thbs3Q05895 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Thbs3Q05895 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.08□□□□□ -0.64
Thbs3Q05895 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Thbs3Q05895 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Thbs3Q05895 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Thbs3Q05895 Daam2-202ENSMUST00000224595 1926 ntBASIC11.07□□□□□ -0.64
Thbs3Q05895 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Thbs3Q05895 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Thbs3Q05895 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Thbs3Q05895 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Thbs3Q05895 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Thbs3Q05895 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Thbs3Q05895 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Thbs3Q05895 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Thbs3Q05895 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Thbs3Q05895 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
Thbs3Q05895 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Thbs3Q05895 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Thbs3Q05895 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Thbs3Q05895 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Thbs3Q05895 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Thbs3Q05895 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.07□□□□□ -0.64
Thbs3Q05895 Gm5187-201ENSMUST00000117317 991 ntBASIC11.07□□□□□ -0.64
Thbs3Q05895 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms