Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col9a1Q05722 Uchl4-201ENSMUST00000039011 1162 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Col9a1Q05722 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col9a1Q05722 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col9a1Q05722 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col9a1Q05722 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col9a1Q05722 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col9a1Q05722 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col9a1Q05722 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Col9a1Q05722 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Col9a1Q05722 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col9a1Q05722 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col9a1Q05722 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.58□□□□□ -0.4
Col9a1Q05722 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col9a1Q05722 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col9a1Q05722 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Col9a1Q05722 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.57□□□□□ -0.4
Col9a1Q05722 AC107763.1-201ENSMUST00000226082 1365 ntBASIC12.57□□□□□ -0.4
Col9a1Q05722 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Col9a1Q05722 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col9a1Q05722 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col9a1Q05722 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col9a1Q05722 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col9a1Q05722 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col9a1Q05722 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col9a1Q05722 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col9a1Q05722 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.57□□□□□ -0.4
Col9a1Q05722 Daam2-202ENSMUST00000224595 1926 ntBASIC12.57□□□□□ -0.4
Col9a1Q05722 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col9a1Q05722 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col9a1Q05722 Gm24891-201ENSMUST00000104391 136 ntBASIC12.57□□□□□ -0.4
Col9a1Q05722 Gm15003-201ENSMUST00000118884 446 ntBASIC12.57□□□□□ -0.4
Col9a1Q05722 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC12.57□□□□□ -0.4
Col9a1Q05722 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Col9a1Q05722 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.57□□□□□ -0.4
Col9a1Q05722 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC12.57□□□□□ -0.4
Col9a1Q05722 Gm28065-201ENSMUST00000185290 833 ntTSL 3 BASIC12.57□□□□□ -0.4
Col9a1Q05722 Gm9230-201ENSMUST00000188228 532 ntBASIC12.57□□□□□ -0.4
Col9a1Q05722 Gm37490-201ENSMUST00000195566 724 ntBASIC12.57□□□□□ -0.4
Col9a1Q05722 Gm5100-201ENSMUST00000195631 589 ntBASIC12.57□□□□□ -0.4
Col9a1Q05722 Gm43520-201ENSMUST00000197996 164 ntBASIC12.57□□□□□ -0.4
Col9a1Q05722 Gm44980-201ENSMUST00000205826 314 ntBASIC12.57□□□□□ -0.4
Col9a1Q05722 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC12.57□□□□□ -0.4
Col9a1Q05722 Gm19187-201ENSMUST00000206781 892 ntBASIC12.57□□□□□ -0.4
Col9a1Q05722 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC12.57□□□□□ -0.4
Col9a1Q05722 AC132237.2-201ENSMUST00000221702 1209 ntBASIC12.57□□□□□ -0.4
Col9a1Q05722 AC134254.4-201ENSMUST00000223086 370 ntBASIC12.57□□□□□ -0.4
Col9a1Q05722 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col9a1Q05722 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Col9a1Q05722 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col9a1Q05722 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col9a1Q05722 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.57□□□□□ -0.4
Col9a1Q05722 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col9a1Q05722 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col9a1Q05722 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col9a1Q05722 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col9a1Q05722 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Col9a1Q05722 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col9a1Q05722 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Col9a1Q05722 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col9a1Q05722 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col9a1Q05722 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col9a1Q05722 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Col9a1Q05722 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Col9a1Q05722 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col9a1Q05722 Gm19210-201ENSMUST00000199562 1350 ntBASIC12.56□□□□□ -0.4
Col9a1Q05722 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.56□□□□□ -0.4
Col9a1Q05722 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.56□□□□□ -0.4
Col9a1Q05722 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Col9a1Q05722 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col9a1Q05722 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col9a1Q05722 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col9a1Q05722 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col9a1Q05722 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col9a1Q05722 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col9a1Q05722 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col9a1Q05722 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.56□□□□□ -0.4
Col9a1Q05722 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.56□□□□□ -0.4
Col9a1Q05722 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col9a1Q05722 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col9a1Q05722 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col9a1Q05722 Gm3543-201ENSMUST00000111870 899 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Col9a1Q05722 Gm11422-201ENSMUST00000118925 1103 ntBASIC12.56□□□□□ -0.4
Col9a1Q05722 Gm14908-201ENSMUST00000120930 1286 ntBASIC12.56□□□□□ -0.4
Col9a1Q05722 Gm12453-201ENSMUST00000121981 331 ntBASIC12.56□□□□□ -0.4
Col9a1Q05722 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC12.56□□□□□ -0.4
Col9a1Q05722 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.56□□□□□ -0.4
Col9a1Q05722 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col9a1Q05722 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col9a1Q05722 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col9a1Q05722 Gm37337-201ENSMUST00000192601 993 ntBASIC12.56□□□□□ -0.4
Col9a1Q05722 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC12.56□□□□□ -0.4
Col9a1Q05722 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col9a1Q05722 Gm43596-201ENSMUST00000202818 884 ntBASIC12.56□□□□□ -0.4
Col9a1Q05722 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Col9a1Q05722 AL589696.1-201ENSMUST00000225711 330 ntBASIC12.56□□□□□ -0.4
Col9a1Q05722 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Col9a1Q05722 AC154484.1-201ENSMUST00000227311 771 ntBASIC12.56□□□□□ -0.4
Col9a1Q05722 CT030652.1-201ENSMUST00000227377 1235 ntBASIC12.56□□□□□ -0.4
Col9a1Q05722 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms