Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col10a1Q05306 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col10a1Q05306 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col10a1Q05306 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.65□□□□□ -0.54
Col10a1Q05306 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Col10a1Q05306 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col10a1Q05306 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.65□□□□□ -0.55
Col10a1Q05306 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Col10a1Q05306 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Col10a1Q05306 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col10a1Q05306 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col10a1Q05306 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col10a1Q05306 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Col10a1Q05306 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col10a1Q05306 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col10a1Q05306 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Col10a1Q05306 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col10a1Q05306 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col10a1Q05306 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Col10a1Q05306 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col10a1Q05306 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col10a1Q05306 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col10a1Q05306 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Col10a1Q05306 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col10a1Q05306 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col10a1Q05306 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col10a1Q05306 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.64□□□□□ -0.55
Col10a1Q05306 Gm43133-201ENSMUST00000197472 463 ntBASIC11.64□□□□□ -0.55
Col10a1Q05306 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Col10a1Q05306 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.64□□□□□ -0.55
Col10a1Q05306 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col10a1Q05306 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Col10a1Q05306 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.64□□□□□ -0.55
Col10a1Q05306 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.64□□□□□ -0.55
Col10a1Q05306 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Col10a1Q05306 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col10a1Q05306 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col10a1Q05306 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.64□□□□□ -0.55
Col10a1Q05306 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Col10a1Q05306 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Col10a1Q05306 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Col10a1Q05306 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col10a1Q05306 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Col10a1Q05306 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col10a1Q05306 Paupar-201ENSMUST00000194826 3482 ntBASIC11.63□□□□□ -0.55
Col10a1Q05306 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col10a1Q05306 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Col10a1Q05306 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Col10a1Q05306 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.63□□□□□ -0.55
Col10a1Q05306 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col10a1Q05306 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col10a1Q05306 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Col10a1Q05306 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col10a1Q05306 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col10a1Q05306 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.63□□□□□ -0.55
Col10a1Q05306 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.63□□□□□ -0.55
Col10a1Q05306 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Col10a1Q05306 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col10a1Q05306 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Col10a1Q05306 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col10a1Q05306 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.63□□□□□ -0.55
Col10a1Q05306 Daam2-202ENSMUST00000224595 1926 ntBASIC11.63□□□□□ -0.55
Col10a1Q05306 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Col10a1Q05306 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.63□□□□□ -0.55
Col10a1Q05306 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
Col10a1Q05306 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.63□□□□□ -0.55
Col10a1Q05306 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Col10a1Q05306 Gm18054-201ENSMUST00000207539 555 ntBASIC11.63□□□□□ -0.55
Col10a1Q05306 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.63□□□□□ -0.55
Col10a1Q05306 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.63□□□□□ -0.55
Col10a1Q05306 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col10a1Q05306 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Col10a1Q05306 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Col10a1Q05306 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Col10a1Q05306 Gm22058-201ENSMUST00000083393 310 ntBASIC11.63□□□□□ -0.55
Col10a1Q05306 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Col10a1Q05306 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col10a1Q05306 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col10a1Q05306 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
Col10a1Q05306 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Col10a1Q05306 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col10a1Q05306 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.63□□□□□ -0.55
Col10a1Q05306 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col10a1Q05306 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col10a1Q05306 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.63□□□□□ -0.55
Col10a1Q05306 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.63□□□□□ -0.55
Col10a1Q05306 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Col10a1Q05306 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col10a1Q05306 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col10a1Q05306 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col10a1Q05306 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Col10a1Q05306 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col10a1Q05306 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col10a1Q05306 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col10a1Q05306 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col10a1Q05306 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Col10a1Q05306 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Col10a1Q05306 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Col10a1Q05306 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col10a1Q05306 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms