Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Nkx2-3P97334 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC15.77■□□□□ 0.11
Nkx2-3P97334 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Nkx2-3P97334 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nkx2-3P97334 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Nkx2-3P97334 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Nkx2-3P97334 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nkx2-3P97334 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nkx2-3P97334 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nkx2-3P97334 Gm6198-201ENSMUST00000191337 2929 ntBASIC15.76■□□□□ 0.11
Nkx2-3P97334 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC15.76■□□□□ 0.11
Nkx2-3P97334 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Nkx2-3P97334 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Nkx2-3P97334 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC15.76■□□□□ 0.11
Nkx2-3P97334 Gm14716-201ENSMUST00000120138 718 ntBASIC15.76■□□□□ 0.11
Nkx2-3P97334 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC15.76■□□□□ 0.11
Nkx2-3P97334 Rprl1-201ENSMUST00000158050 327 ntBASIC15.76■□□□□ 0.11
Nkx2-3P97334 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC15.76■□□□□ 0.11
Nkx2-3P97334 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
Nkx2-3P97334 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC15.76■□□□□ 0.11
Nkx2-3P97334 Gm4607-201ENSMUST00000206649 577 ntBASIC15.76■□□□□ 0.11
Nkx2-3P97334 Gm10109-202ENSMUST00000206890 1211 ntBASIC15.76■□□□□ 0.11
Nkx2-3P97334 AC133602.1-201ENSMUST00000227510 509 ntBASIC15.76■□□□□ 0.11
Nkx2-3P97334 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nkx2-3P97334 Gm9826-201ENSMUST00000029124 1299 ntBASIC15.76■□□□□ 0.11
Nkx2-3P97334 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nkx2-3P97334 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Nkx2-3P97334 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Nkx2-3P97334 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nkx2-3P97334 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC15.76■□□□□ 0.11
Nkx2-3P97334 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Nkx2-3P97334 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nkx2-3P97334 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nkx2-3P97334 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nkx2-3P97334 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nkx2-3P97334 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC15.76■□□□□ 0.11
Nkx2-3P97334 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
Nkx2-3P97334 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Nkx2-3P97334 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Nkx2-3P97334 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx2-3P97334 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx2-3P97334 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx2-3P97334 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx2-3P97334 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx2-3P97334 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC15.75■□□□□ 0.11
Nkx2-3P97334 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx2-3P97334 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx2-3P97334 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Nkx2-3P97334 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Nkx2-3P97334 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx2-3P97334 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Nkx2-3P97334 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx2-3P97334 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Nkx2-3P97334 Gm23596-201ENSMUST00000104304 132 ntBASIC15.75■□□□□ 0.11
Nkx2-3P97334 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC15.75■□□□□ 0.11
Nkx2-3P97334 Gm10051-201ENSMUST00000145209 414 ntBASIC15.75■□□□□ 0.11
Nkx2-3P97334 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx2-3P97334 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC15.75■□□□□ 0.11
Nkx2-3P97334 Gm17827-201ENSMUST00000211825 742 ntBASIC15.75■□□□□ 0.11
Nkx2-3P97334 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC15.75■□□□□ 0.11
Nkx2-3P97334 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx2-3P97334 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx2-3P97334 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx2-3P97334 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx2-3P97334 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx2-3P97334 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx2-3P97334 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx2-3P97334 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx2-3P97334 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx2-3P97334 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx2-3P97334 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx2-3P97334 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx2-3P97334 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC15.74■□□□□ 0.11
Nkx2-3P97334 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx2-3P97334 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx2-3P97334 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC15.74■□□□□ 0.11
Nkx2-3P97334 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx2-3P97334 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Nkx2-3P97334 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx2-3P97334 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Nkx2-3P97334 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx2-3P97334 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx2-3P97334 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC15.74■□□□□ 0.11
Nkx2-3P97334 Gm18227-201ENSMUST00000211082 1468 ntBASIC15.74■□□□□ 0.11
Nkx2-3P97334 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx2-3P97334 Gm43677-201ENSMUST00000198098 2378 ntBASIC15.74■□□□□ 0.11
Nkx2-3P97334 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Nkx2-3P97334 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC15.74■□□□□ 0.11
Nkx2-3P97334 Gm25881-201ENSMUST00000157783 103 ntBASIC15.74■□□□□ 0.11
Nkx2-3P97334 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Nkx2-3P97334 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx2-3P97334 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx2-3P97334 Gm5732-201ENSMUST00000182596 1007 ntBASIC15.74■□□□□ 0.11
Nkx2-3P97334 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx2-3P97334 CT009713.8-201ENSMUST00000225448 560 ntBASIC15.74■□□□□ 0.11
Nkx2-3P97334 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx2-3P97334 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx2-3P97334 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx2-3P97334 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
Nkx2-3P97334 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms