Protein–RNA interactions for Protein: P70196

Traf6, TNF receptor-associated factor 6, mousemouse

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6P70196 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Traf6P70196 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Traf6P70196 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Traf6P70196 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Traf6P70196 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.45□□□□□ -0.42
Traf6P70196 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Traf6P70196 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Traf6P70196 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Traf6P70196 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Traf6P70196 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Traf6P70196 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Traf6P70196 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Traf6P70196 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Traf6P70196 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Traf6P70196 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Traf6P70196 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Traf6P70196 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Traf6P70196 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Traf6P70196 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Traf6P70196 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.44□□□□□ -0.42
Traf6P70196 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Traf6P70196 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.44□□□□□ -0.42
Traf6P70196 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Traf6P70196 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Traf6P70196 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Traf6P70196 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.44□□□□□ -0.42
Traf6P70196 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Traf6P70196 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.44□□□□□ -0.42
Traf6P70196 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Traf6P70196 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Traf6P70196 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Traf6P70196 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Traf6P70196 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Traf6P70196 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC12.44□□□□□ -0.42
Traf6P70196 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Traf6P70196 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Traf6P70196 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Traf6P70196 Gm8810-201ENSMUST00000172895 754 ntBASIC12.44□□□□□ -0.42
Traf6P70196 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.44□□□□□ -0.42
Traf6P70196 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Traf6P70196 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Traf6P70196 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Traf6P70196 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Traf6P70196 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Traf6P70196 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Traf6P70196 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Traf6P70196 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Traf6P70196 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Traf6P70196 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Traf6P70196 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Traf6P70196 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Traf6P70196 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Traf6P70196 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Traf6P70196 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Traf6P70196 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Traf6P70196 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Traf6P70196 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Traf6P70196 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Traf6P70196 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Traf6P70196 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.43□□□□□ -0.42
Traf6P70196 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Traf6P70196 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Traf6P70196 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Traf6P70196 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Traf6P70196 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Traf6P70196 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Traf6P70196 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Traf6P70196 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Traf6P70196 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Traf6P70196 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Traf6P70196 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Traf6P70196 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.43□□□□□ -0.42
Traf6P70196 Gm16479-201ENSMUST00000121706 932 ntBASIC12.43□□□□□ -0.42
Traf6P70196 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Traf6P70196 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Traf6P70196 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Traf6P70196 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.43□□□□□ -0.42
Traf6P70196 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Traf6P70196 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.43□□□□□ -0.42
Traf6P70196 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.43□□□□□ -0.42
Traf6P70196 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
Traf6P70196 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.43□□□□□ -0.42
Traf6P70196 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.43□□□□□ -0.42
Traf6P70196 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Traf6P70196 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Traf6P70196 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Traf6P70196 Mir339-201ENSMUST00000083659 96 ntBASIC12.43□□□□□ -0.42
Traf6P70196 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Traf6P70196 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Traf6P70196 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.43□□□□□ -0.42
Traf6P70196 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Traf6P70196 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Traf6P70196 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Traf6P70196 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Traf6P70196 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Traf6P70196 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Traf6P70196 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Traf6P70196 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Traf6P70196 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Traf6P70196 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms