Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC13.92□□□□□ -0.18
Hmgb1P63158 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgb1P63158 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgb1P63158 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgb1P63158 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgb1P63158 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgb1P63158 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgb1P63158 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgb1P63158 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgb1P63158 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.92□□□□□ -0.18
Hmgb1P63158 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgb1P63158 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Hmgb1P63158 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgb1P63158 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.91□□□□□ -0.18
Hmgb1P63158 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgb1P63158 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.91□□□□□ -0.18
Hmgb1P63158 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.91□□□□□ -0.18
Hmgb1P63158 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgb1P63158 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Hmgb1P63158 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgb1P63158 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgb1P63158 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgb1P63158 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgb1P63158 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgb1P63158 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Hmgb1P63158 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.91□□□□□ -0.18
Hmgb1P63158 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgb1P63158 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgb1P63158 Gm19184-201ENSMUST00000196798 928 ntBASIC13.91□□□□□ -0.18
Hmgb1P63158 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.91□□□□□ -0.18
Hmgb1P63158 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.91□□□□□ -0.18
Hmgb1P63158 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgb1P63158 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.91□□□□□ -0.18
Hmgb1P63158 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgb1P63158 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.91□□□□□ -0.18
Hmgb1P63158 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgb1P63158 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Hmgb1P63158 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgb1P63158 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgb1P63158 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgb1P63158 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgb1P63158 CK137956-201ENSMUST00000030614 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgb1P63158 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.91□□□□□ -0.18
Hmgb1P63158 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgb1P63158 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Hmgb1P63158 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgb1P63158 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgb1P63158 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Hmgb1P63158 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Hmgb1P63158 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.9□□□□□ -0.18
Hmgb1P63158 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgb1P63158 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.9□□□□□ -0.18
Hmgb1P63158 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.9□□□□□ -0.18
Hmgb1P63158 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgb1P63158 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgb1P63158 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.9□□□□□ -0.18
Hmgb1P63158 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgb1P63158 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgb1P63158 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgb1P63158 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgb1P63158 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgb1P63158 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgb1P63158 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgb1P63158 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Hmgb1P63158 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.9□□□□□ -0.18
Hmgb1P63158 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgb1P63158 Gm27486-201ENSMUST00000184923 80 ntBASIC13.9□□□□□ -0.18
Hmgb1P63158 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgb1P63158 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.9□□□□□ -0.18
Hmgb1P63158 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.9□□□□□ -0.18
Hmgb1P63158 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgb1P63158 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgb1P63158 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgb1P63158 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgb1P63158 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Hmgb1P63158 Gm10146-201ENSMUST00000072739 309 ntBASIC13.9□□□□□ -0.18
Hmgb1P63158 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Hmgb1P63158 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.9□□□□□ -0.18
Hmgb1P63158 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgb1P63158 CT573086.2-201ENSMUST00000227277 4992 ntBASIC13.9□□□□□ -0.18
Hmgb1P63158 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgb1P63158 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.9□□□□□ -0.18
Hmgb1P63158 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgb1P63158 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgb1P63158 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Hmgb1P63158 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.9□□□□□ -0.19
Hmgb1P63158 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13.9□□□□□ -0.19
Hmgb1P63158 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgb1P63158 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgb1P63158 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgb1P63158 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgb1P63158 AC164426.2-201ENSMUST00000225993 2492 ntBASIC13.89□□□□□ -0.19
Hmgb1P63158 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgb1P63158 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgb1P63158 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgb1P63158 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgb1P63158 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.89□□□□□ -0.19
Hmgb1P63158 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgb1P63158 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgb1P63158 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms