Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nup43P59235 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nup43P59235 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.91□□□□□ -0.5
Nup43P59235 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.91□□□□□ -0.5
Nup43P59235 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nup43P59235 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.91□□□□□ -0.5
Nup43P59235 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nup43P59235 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nup43P59235 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nup43P59235 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nup43P59235 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nup43P59235 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nup43P59235 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nup43P59235 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nup43P59235 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nup43P59235 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nup43P59235 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nup43P59235 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.91□□□□□ -0.5
Nup43P59235 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nup43P59235 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC11.91□□□□□ -0.5
Nup43P59235 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.91□□□□□ -0.5
Nup43P59235 Gm43630-201ENSMUST00000201550 776 ntBASIC11.91□□□□□ -0.5
Nup43P59235 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nup43P59235 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.91□□□□□ -0.5
Nup43P59235 Gm45930-201ENSMUST00000221330 292 ntBASIC11.91□□□□□ -0.5
Nup43P59235 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.91□□□□□ -0.5
Nup43P59235 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nup43P59235 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Nup43P59235 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Nup43P59235 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Nup43P59235 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nup43P59235 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nup43P59235 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nup43P59235 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nup43P59235 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nup43P59235 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nup43P59235 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Nup43P59235 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nup43P59235 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.91□□□□□ -0.5
Nup43P59235 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
Nup43P59235 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nup43P59235 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nup43P59235 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
Nup43P59235 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nup43P59235 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nup43P59235 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nup43P59235 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Nup43P59235 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nup43P59235 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nup43P59235 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nup43P59235 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Nup43P59235 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nup43P59235 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nup43P59235 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.9□□□□□ -0.5
Nup43P59235 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nup43P59235 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nup43P59235 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nup43P59235 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nup43P59235 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nup43P59235 Gm10434-201ENSMUST00000101158 471 ntBASIC11.9□□□□□ -0.5
Nup43P59235 Gm11793-201ENSMUST00000120433 981 ntBASIC11.9□□□□□ -0.5
Nup43P59235 Gm11964-201ENSMUST00000120982 444 ntBASIC11.9□□□□□ -0.5
Nup43P59235 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.9□□□□□ -0.5
Nup43P59235 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nup43P59235 Gm8018-201ENSMUST00000173536 789 ntBASIC11.9□□□□□ -0.5
Nup43P59235 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Nup43P59235 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.9□□□□□ -0.5
Nup43P59235 Mospd4-201ENSMUST00000180618 576 ntBASIC11.9□□□□□ -0.5
Nup43P59235 Gm38158-201ENSMUST00000194617 339 ntBASIC11.9□□□□□ -0.5
Nup43P59235 Gm43118-201ENSMUST00000199149 775 ntBASIC11.9□□□□□ -0.5
Nup43P59235 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.9□□□□□ -0.5
Nup43P59235 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nup43P59235 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.9□□□□□ -0.5
Nup43P59235 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nup43P59235 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nup43P59235 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nup43P59235 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nup43P59235 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nup43P59235 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Nup43P59235 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nup43P59235 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nup43P59235 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nup43P59235 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nup43P59235 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nup43P59235 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nup43P59235 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nup43P59235 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nup43P59235 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Nup43P59235 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nup43P59235 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nup43P59235 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nup43P59235 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nup43P59235 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nup43P59235 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Nup43P59235 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nup43P59235 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nup43P59235 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC11.9□□□□□ -0.51
Nup43P59235 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Nup43P59235 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Nup43P59235 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.9□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms