Protein–RNA interactions for Protein: P56390

Cks2, Cyclin-dependent kinases regulatory subunit 2, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks2P56390 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cks2P56390 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cks2P56390 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cks2P56390 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Cks2P56390 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cks2P56390 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Cks2P56390 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cks2P56390 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cks2P56390 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cks2P56390 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cks2P56390 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cks2P56390 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cks2P56390 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cks2P56390 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cks2P56390 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC10.5□□□□□ -0.73
Cks2P56390 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cks2P56390 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cks2P56390 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cks2P56390 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cks2P56390 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Cks2P56390 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cks2P56390 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cks2P56390 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cks2P56390 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cks2P56390 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cks2P56390 Gm14057-201ENSMUST00000120631 482 ntBASIC10.5□□□□□ -0.73
Cks2P56390 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC10.5□□□□□ -0.73
Cks2P56390 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Cks2P56390 Gm27390-201ENSMUST00000184516 176 ntBASIC10.5□□□□□ -0.73
Cks2P56390 Mir7023-201ENSMUST00000185093 64 ntBASIC10.5□□□□□ -0.73
Cks2P56390 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC10.5□□□□□ -0.73
Cks2P56390 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC10.5□□□□□ -0.73
Cks2P56390 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cks2P56390 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC10.5□□□□□ -0.73
Cks2P56390 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
Cks2P56390 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC10.5□□□□□ -0.73
Cks2P56390 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC10.5□□□□□ -0.73
Cks2P56390 AC132317.1-201ENSMUST00000227227 962 ntBASIC10.5□□□□□ -0.73
Cks2P56390 Gm10371-202ENSMUST00000228010 1081 ntBASIC10.5□□□□□ -0.73
Cks2P56390 AC125117.1-201ENSMUST00000228121 468 ntBASIC10.5□□□□□ -0.73
Cks2P56390 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC10.5□□□□□ -0.73
Cks2P56390 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cks2P56390 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cks2P56390 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cks2P56390 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cks2P56390 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cks2P56390 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cks2P56390 AC166574.4-201ENSMUST00000227165 1937 ntBASIC10.5□□□□□ -0.73
Cks2P56390 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cks2P56390 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Cks2P56390 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC10.5□□□□□ -0.73
Cks2P56390 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC10.5□□□□□ -0.73
Cks2P56390 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cks2P56390 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cks2P56390 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cks2P56390 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC10.5□□□□□ -0.73
Cks2P56390 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC10.5□□□□□ -0.73
Cks2P56390 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cks2P56390 Gm6211-201ENSMUST00000147973 4275 ntBASIC10.5□□□□□ -0.73
Cks2P56390 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cks2P56390 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cks2P56390 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.49□□□□□ -0.73
Cks2P56390 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.49□□□□□ -0.73
Cks2P56390 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC10.49□□□□□ -0.73
Cks2P56390 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cks2P56390 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC10.49□□□□□ -0.73
Cks2P56390 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cks2P56390 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cks2P56390 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Cks2P56390 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cks2P56390 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cks2P56390 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cks2P56390 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cks2P56390 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cks2P56390 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cks2P56390 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cks2P56390 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC10.49□□□□□ -0.73
Cks2P56390 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC10.49□□□□□ -0.73
Cks2P56390 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cks2P56390 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cks2P56390 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
Cks2P56390 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Cks2P56390 Gm11618-201ENSMUST00000117946 267 ntBASIC10.49□□□□□ -0.73
Cks2P56390 Gm14704-201ENSMUST00000120300 874 ntBASIC10.49□□□□□ -0.73
Cks2P56390 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cks2P56390 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cks2P56390 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cks2P56390 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC10.49□□□□□ -0.73
Cks2P56390 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cks2P56390 Gm20949-201ENSMUST00000206478 952 ntBASIC10.49□□□□□ -0.73
Cks2P56390 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC10.49□□□□□ -0.73
Cks2P56390 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC10.49□□□□□ -0.73
Cks2P56390 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cks2P56390 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Cks2P56390 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC10.49□□□□□ -0.73
Cks2P56390 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Cks2P56390 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cks2P56390 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cks2P56390 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cks2P56390 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms