Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.55□□□□□ -0.4
Atxn1P54254 Gm13875-201ENSMUST00000120162 282 ntBASIC12.55□□□□□ -0.4
Atxn1P54254 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC12.55□□□□□ -0.4
Atxn1P54254 Gm17040-202ENSMUST00000170597 889 ntBASIC12.55□□□□□ -0.4
Atxn1P54254 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.55□□□□□ -0.4
Atxn1P54254 Gm9540-201ENSMUST00000188230 478 ntBASIC12.55□□□□□ -0.4
Atxn1P54254 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.55□□□□□ -0.4
Atxn1P54254 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Atxn1P54254 Gm45224-201ENSMUST00000208203 414 ntBASIC12.55□□□□□ -0.4
Atxn1P54254 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.55□□□□□ -0.4
Atxn1P54254 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.55□□□□□ -0.4
Atxn1P54254 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.55□□□□□ -0.4
Atxn1P54254 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Atxn1P54254 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Atxn1P54254 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.55□□□□□ -0.4
Atxn1P54254 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Atxn1P54254 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Atxn1P54254 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Atxn1P54254 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Atxn1P54254 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Atxn1P54254 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Atxn1P54254 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Atxn1P54254 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Atxn1P54254 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Atxn1P54254 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Atxn1P54254 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Atxn1P54254 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Atxn1P54254 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Atxn1P54254 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.55□□□□□ -0.4
Atxn1P54254 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Atxn1P54254 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Atxn1P54254 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Atxn1P54254 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Atxn1P54254 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Atxn1P54254 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Atxn1P54254 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Atxn1P54254 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Atxn1P54254 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atxn1P54254 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atxn1P54254 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atxn1P54254 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atxn1P54254 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atxn1P54254 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atxn1P54254 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atxn1P54254 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atxn1P54254 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atxn1P54254 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atxn1P54254 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atxn1P54254 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.54□□□□□ -0.4
Atxn1P54254 Gm12266-201ENSMUST00000120311 962 ntBASIC12.54□□□□□ -0.4
Atxn1P54254 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.54□□□□□ -0.4
Atxn1P54254 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.54□□□□□ -0.4
Atxn1P54254 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.54□□□□□ -0.4
Atxn1P54254 Gm7003-201ENSMUST00000195089 312 ntBASIC12.54□□□□□ -0.4
Atxn1P54254 Gm18893-201ENSMUST00000198416 943 ntBASIC12.54□□□□□ -0.4
Atxn1P54254 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atxn1P54254 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.54□□□□□ -0.4
Atxn1P54254 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Atxn1P54254 Gm45433-201ENSMUST00000209386 247 ntBASIC12.54□□□□□ -0.4
Atxn1P54254 Gm7600-201ENSMUST00000209657 785 ntBASIC12.54□□□□□ -0.4
Atxn1P54254 Gm5904-201ENSMUST00000210286 865 ntBASIC12.54□□□□□ -0.4
Atxn1P54254 Gm7848-201ENSMUST00000210739 718 ntBASIC12.54□□□□□ -0.4
Atxn1P54254 Gm8712-201ENSMUST00000221090 701 ntBASIC12.54□□□□□ -0.4
Atxn1P54254 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atxn1P54254 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Atxn1P54254 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atxn1P54254 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atxn1P54254 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Atxn1P54254 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atxn1P54254 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Atxn1P54254 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.54□□□□□ -0.4
Atxn1P54254 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atxn1P54254 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atxn1P54254 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Atxn1P54254 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Atxn1P54254 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atxn1P54254 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atxn1P54254 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atxn1P54254 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Atxn1P54254 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atxn1P54254 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atxn1P54254 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.53□□□□□ -0.4
Atxn1P54254 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.53□□□□□ -0.4
Atxn1P54254 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atxn1P54254 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atxn1P54254 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atxn1P54254 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.53□□□□□ -0.4
Atxn1P54254 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Atxn1P54254 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Atxn1P54254 Gm13047-201ENSMUST00000117116 815 ntBASIC12.53□□□□□ -0.4
Atxn1P54254 Gm13888-201ENSMUST00000119148 422 ntBASIC12.53□□□□□ -0.4
Atxn1P54254 Gm11675-201ENSMUST00000121873 832 ntBASIC12.53□□□□□ -0.4
Atxn1P54254 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Atxn1P54254 Gm24749-201ENSMUST00000157838 343 ntBASIC12.53□□□□□ -0.4
Atxn1P54254 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Atxn1P54254 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.53□□□□□ -0.4
Atxn1P54254 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.53□□□□□ -0.4
Atxn1P54254 AC159103.1-201ENSMUST00000228325 429 ntBASIC12.53□□□□□ -0.4
Atxn1P54254 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC12.53□□□□□ -0.4
Atxn1P54254 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms