Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox1P53783 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox1P53783 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox1P53783 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox1P53783 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sox1P53783 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox1P53783 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Sox1P53783 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sox1P53783 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.86□□□□□ -0.35
Sox1P53783 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox1P53783 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC12.86□□□□□ -0.35
Sox1P53783 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.86□□□□□ -0.35
Sox1P53783 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.86□□□□□ -0.35
Sox1P53783 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.86□□□□□ -0.35
Sox1P53783 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Sox1P53783 Gm17877-201ENSMUST00000192578 814 ntBASIC12.86□□□□□ -0.35
Sox1P53783 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC12.86□□□□□ -0.35
Sox1P53783 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sox1P53783 CT009738.1-201ENSMUST00000219031 809 ntBASIC12.86□□□□□ -0.35
Sox1P53783 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC12.86□□□□□ -0.35
Sox1P53783 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC12.86□□□□□ -0.35
Sox1P53783 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox1P53783 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox1P53783 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sox1P53783 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox1P53783 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.86□□□□□ -0.35
Sox1P53783 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sox1P53783 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox1P53783 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox1P53783 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox1P53783 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox1P53783 Gm37859-201ENSMUST00000195529 2173 ntBASIC12.86□□□□□ -0.35
Sox1P53783 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sox1P53783 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Sox1P53783 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox1P53783 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC12.85□□□□□ -0.35
Sox1P53783 Gm26013-201ENSMUST00000104404 119 ntBASIC12.85□□□□□ -0.35
Sox1P53783 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.85□□□□□ -0.35
Sox1P53783 Gm12036-201ENSMUST00000120008 530 ntBASIC12.85□□□□□ -0.35
Sox1P53783 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC12.85□□□□□ -0.35
Sox1P53783 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC12.85□□□□□ -0.35
Sox1P53783 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Sox1P53783 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sox1P53783 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sox1P53783 Gm17798-201ENSMUST00000182282 1035 ntBASIC12.85□□□□□ -0.35
Sox1P53783 Gm8100-201ENSMUST00000182906 988 ntBASIC12.85□□□□□ -0.35
Sox1P53783 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.85□□□□□ -0.35
Sox1P53783 Gm29410-201ENSMUST00000188383 694 ntBASIC12.85□□□□□ -0.35
Sox1P53783 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.85□□□□□ -0.35
Sox1P53783 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Sox1P53783 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.85□□□□□ -0.35
Sox1P53783 Gm8768-201ENSMUST00000220020 826 ntBASIC12.85□□□□□ -0.35
Sox1P53783 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC12.85□□□□□ -0.35
Sox1P53783 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Sox1P53783 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Sox1P53783 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox1P53783 Gm26448-201ENSMUST00000082446 203 ntBASIC12.85□□□□□ -0.35
Sox1P53783 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Sox1P53783 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox1P53783 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sox1P53783 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox1P53783 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.85□□□□□ -0.35
Sox1P53783 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Sox1P53783 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sox1P53783 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.85□□□□□ -0.35
Sox1P53783 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sox1P53783 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sox1P53783 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.85□□□□□ -0.35
Sox1P53783 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sox1P53783 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox1P53783 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Sox1P53783 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Sox1P53783 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC12.85□□□□□ -0.35
Sox1P53783 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox1P53783 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox1P53783 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox1P53783 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox1P53783 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox1P53783 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox1P53783 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sox1P53783 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox1P53783 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox1P53783 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox1P53783 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Sox1P53783 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.84□□□□□ -0.35
Sox1P53783 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox1P53783 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Sox1P53783 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Sox1P53783 Gm25063-201ENSMUST00000104666 94 ntBASIC12.84□□□□□ -0.35
Sox1P53783 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sox1P53783 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC12.84□□□□□ -0.35
Sox1P53783 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox1P53783 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sox1P53783 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC12.84□□□□□ -0.35
Sox1P53783 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC12.84□□□□□ -0.35
Sox1P53783 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sox1P53783 Gm25998-201ENSMUST00000175397 53 ntBASIC12.84□□□□□ -0.35
Sox1P53783 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sox1P53783 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC12.84□□□□□ -0.35
Sox1P53783 Gm8531-201ENSMUST00000188319 893 ntBASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms