Protein–RNA interactions for Protein: P48759

Ptx3, Pentraxin-related protein PTX3, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptx3P48759 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.77□□□□□ -0.52
Ptx3P48759 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ptx3P48759 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ptx3P48759 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Ptx3P48759 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Ptx3P48759 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ptx3P48759 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ptx3P48759 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ptx3P48759 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ptx3P48759 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.77□□□□□ -0.53
Ptx3P48759 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ptx3P48759 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.77□□□□□ -0.53
Ptx3P48759 Gm13813-201ENSMUST00000120998 787 ntBASIC11.77□□□□□ -0.53
Ptx3P48759 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.77□□□□□ -0.53
Ptx3P48759 Gm25668-201ENSMUST00000157700 129 ntBASIC11.77□□□□□ -0.53
Ptx3P48759 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ptx3P48759 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Ptx3P48759 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.77□□□□□ -0.53
Ptx3P48759 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.77□□□□□ -0.53
Ptx3P48759 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.77□□□□□ -0.53
Ptx3P48759 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ptx3P48759 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Ptx3P48759 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.77□□□□□ -0.53
Ptx3P48759 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ptx3P48759 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ptx3P48759 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ptx3P48759 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ptx3P48759 Gm22058-201ENSMUST00000083393 310 ntBASIC11.77□□□□□ -0.53
Ptx3P48759 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ptx3P48759 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.77□□□□□ -0.53
Ptx3P48759 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Ptx3P48759 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ptx3P48759 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ptx3P48759 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ptx3P48759 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.77□□□□□ -0.53
Ptx3P48759 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ptx3P48759 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ptx3P48759 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ptx3P48759 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ptx3P48759 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ptx3P48759 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ptx3P48759 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.77□□□□□ -0.53
Ptx3P48759 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ptx3P48759 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.77□□□□□ -0.53
Ptx3P48759 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.77□□□□□ -0.53
Ptx3P48759 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ptx3P48759 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Ptx3P48759 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ptx3P48759 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ptx3P48759 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.76□□□□□ -0.53
Ptx3P48759 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ptx3P48759 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Ptx3P48759 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.76□□□□□ -0.53
Ptx3P48759 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ptx3P48759 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ptx3P48759 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ptx3P48759 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ptx3P48759 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.76□□□□□ -0.53
Ptx3P48759 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Ptx3P48759 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ptx3P48759 Gm22323-201ENSMUST00000103832 109 ntBASIC11.76□□□□□ -0.53
Ptx3P48759 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ptx3P48759 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ptx3P48759 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.76□□□□□ -0.53
Ptx3P48759 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.76□□□□□ -0.53
Ptx3P48759 Gm44405-201ENSMUST00000198952 126 ntBASIC11.76□□□□□ -0.53
Ptx3P48759 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ptx3P48759 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.76□□□□□ -0.53
Ptx3P48759 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Ptx3P48759 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ptx3P48759 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ptx3P48759 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Ptx3P48759 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.76□□□□□ -0.53
Ptx3P48759 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.76□□□□□ -0.53
Ptx3P48759 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ptx3P48759 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ptx3P48759 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ptx3P48759 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ptx3P48759 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ptx3P48759 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.76□□□□□ -0.53
Ptx3P48759 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.76□□□□□ -0.53
Ptx3P48759 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ptx3P48759 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ptx3P48759 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Ptx3P48759 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Ptx3P48759 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Ptx3P48759 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ptx3P48759 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ptx3P48759 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Ptx3P48759 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ptx3P48759 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.75□□□□□ -0.53
Ptx3P48759 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Ptx3P48759 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ptx3P48759 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ptx3P48759 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ptx3P48759 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ptx3P48759 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ptx3P48759 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
Ptx3P48759 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ptx3P48759 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms