Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.41□□□□□ -0.58
Rfx3P48381 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.41□□□□□ -0.58
Rfx3P48381 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rfx3P48381 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rfx3P48381 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rfx3P48381 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.41□□□□□ -0.58
Rfx3P48381 Gm9816-201ENSMUST00000122292 1414 ntBASIC11.41□□□□□ -0.58
Rfx3P48381 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rfx3P48381 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.41□□□□□ -0.58
Rfx3P48381 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rfx3P48381 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.41□□□□□ -0.58
Rfx3P48381 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Rfx3P48381 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rfx3P48381 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rfx3P48381 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.4□□□□□ -0.58
Rfx3P48381 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rfx3P48381 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rfx3P48381 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rfx3P48381 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rfx3P48381 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Rfx3P48381 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Rfx3P48381 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rfx3P48381 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.4□□□□□ -0.58
Rfx3P48381 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rfx3P48381 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rfx3P48381 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rfx3P48381 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rfx3P48381 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rfx3P48381 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC11.4□□□□□ -0.58
Rfx3P48381 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.4□□□□□ -0.58
Rfx3P48381 Gm18187-201ENSMUST00000196476 984 ntBASIC11.4□□□□□ -0.58
Rfx3P48381 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rfx3P48381 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.4□□□□□ -0.58
Rfx3P48381 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.4□□□□□ -0.58
Rfx3P48381 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.4□□□□□ -0.58
Rfx3P48381 Gm17794-201ENSMUST00000220252 955 ntBASIC11.4□□□□□ -0.58
Rfx3P48381 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.4□□□□□ -0.58
Rfx3P48381 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rfx3P48381 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rfx3P48381 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rfx3P48381 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Rfx3P48381 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rfx3P48381 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.4□□□□□ -0.58
Rfx3P48381 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rfx3P48381 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rfx3P48381 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rfx3P48381 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rfx3P48381 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.4□□□□□ -0.59
Rfx3P48381 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Rfx3P48381 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Rfx3P48381 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rfx3P48381 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rfx3P48381 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Rfx3P48381 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.39□□□□□ -0.59
Rfx3P48381 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rfx3P48381 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Rfx3P48381 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.39□□□□□ -0.59
Rfx3P48381 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rfx3P48381 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rfx3P48381 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rfx3P48381 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rfx3P48381 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.39□□□□□ -0.59
Rfx3P48381 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.39□□□□□ -0.59
Rfx3P48381 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.39□□□□□ -0.59
Rfx3P48381 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rfx3P48381 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rfx3P48381 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Rfx3P48381 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rfx3P48381 Gm8213-201ENSMUST00000118191 441 ntBASIC11.39□□□□□ -0.59
Rfx3P48381 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rfx3P48381 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.39□□□□□ -0.59
Rfx3P48381 Gm28693-202ENSMUST00000190758 331 ntBASIC11.39□□□□□ -0.59
Rfx3P48381 Gm43433-201ENSMUST00000196573 481 ntBASIC11.39□□□□□ -0.59
Rfx3P48381 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC11.39□□□□□ -0.59
Rfx3P48381 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.39□□□□□ -0.59
Rfx3P48381 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.39□□□□□ -0.59
Rfx3P48381 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.39□□□□□ -0.59
Rfx3P48381 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.39□□□□□ -0.59
Rfx3P48381 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rfx3P48381 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rfx3P48381 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rfx3P48381 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rfx3P48381 Gm5356-201ENSMUST00000093326 615 ntBASIC11.39□□□□□ -0.59
Rfx3P48381 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rfx3P48381 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rfx3P48381 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.39□□□□□ -0.59
Rfx3P48381 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Rfx3P48381 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rfx3P48381 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Rfx3P48381 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rfx3P48381 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rfx3P48381 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rfx3P48381 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rfx3P48381 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rfx3P48381 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rfx3P48381 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rfx3P48381 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rfx3P48381 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rfx3P48381 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rfx3P48381 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms