Protein–RNA interactions for Protein: P48298

Ccl11, Eotaxin, mousemouse

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl11P48298 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC10.68□□□□□ -0.7
Ccl11P48298 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl11P48298 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl11P48298 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl11P48298 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC10.68□□□□□ -0.7
Ccl11P48298 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl11P48298 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl11P48298 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl11P48298 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl11P48298 Gm4864-201ENSMUST00000219894 1461 ntBASIC10.68□□□□□ -0.7
Ccl11P48298 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl11P48298 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC10.67□□□□□ -0.7
Ccl11P48298 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Ccl11P48298 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl11P48298 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl11P48298 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl11P48298 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl11P48298 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl11P48298 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl11P48298 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl11P48298 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC10.67□□□□□ -0.7
Ccl11P48298 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl11P48298 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl11P48298 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC10.67□□□□□ -0.7
Ccl11P48298 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl11P48298 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Ccl11P48298 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl11P48298 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Ccl11P48298 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Ccl11P48298 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl11P48298 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
Ccl11P48298 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl11P48298 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC10.67□□□□□ -0.7
Ccl11P48298 Gm14999-201ENSMUST00000121039 624 ntBASIC10.67□□□□□ -0.7
Ccl11P48298 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl11P48298 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl11P48298 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC10.67□□□□□ -0.7
Ccl11P48298 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC10.67□□□□□ -0.7
Ccl11P48298 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl11P48298 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl11P48298 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl11P48298 AC126253.1-202ENSMUST00000226732 835 ntBASIC10.67□□□□□ -0.7
Ccl11P48298 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl11P48298 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl11P48298 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
Ccl11P48298 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl11P48298 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl11P48298 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl11P48298 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Ccl11P48298 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Ccl11P48298 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl11P48298 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl11P48298 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl11P48298 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Ccl11P48298 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl11P48298 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Ccl11P48298 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl11P48298 Gm5939-201ENSMUST00000119613 2874 ntBASIC10.67□□□□□ -0.7
Ccl11P48298 Gm10176-201ENSMUST00000159707 2264 ntBASIC10.67□□□□□ -0.7
Ccl11P48298 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl11P48298 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl11P48298 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl11P48298 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl11P48298 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Ccl11P48298 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl11P48298 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Ccl11P48298 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl11P48298 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl11P48298 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl11P48298 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl11P48298 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl11P48298 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl11P48298 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl11P48298 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl11P48298 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl11P48298 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl11P48298 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl11P48298 AC123857.2-201ENSMUST00000225756 1582 ntBASIC10.66□□□□□ -0.7
Ccl11P48298 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl11P48298 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Ccl11P48298 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl11P48298 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl11P48298 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl11P48298 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl11P48298 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl11P48298 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Ccl11P48298 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC10.66□□□□□ -0.7
Ccl11P48298 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Ccl11P48298 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC10.66□□□□□ -0.7
Ccl11P48298 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl11P48298 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC10.66□□□□□ -0.7
Ccl11P48298 Gm38317-201ENSMUST00000195564 343 ntBASIC10.66□□□□□ -0.7
Ccl11P48298 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC10.66□□□□□ -0.7
Ccl11P48298 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC10.66□□□□□ -0.7
Ccl11P48298 Gm9678-201ENSMUST00000198979 1149 ntBASIC10.66□□□□□ -0.7
Ccl11P48298 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC10.66□□□□□ -0.7
Ccl11P48298 Gm8712-201ENSMUST00000221090 701 ntBASIC10.66□□□□□ -0.7
Ccl11P48298 CT485787.1-201ENSMUST00000225617 968 ntBASIC10.66□□□□□ -0.7
Ccl11P48298 AC161537.1-201ENSMUST00000226199 1015 ntBASIC10.66□□□□□ -0.7
Ccl11P48298 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms