Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh4P39038 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh4P39038 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh4P39038 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh4P39038 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh4P39038 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh4P39038 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Cdh4P39038 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh4P39038 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.1□□□□□ -0.47
Cdh4P39038 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh4P39038 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh4P39038 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.1□□□□□ -0.47
Cdh4P39038 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh4P39038 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.1□□□□□ -0.47
Cdh4P39038 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cdh4P39038 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh4P39038 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.1□□□□□ -0.47
Cdh4P39038 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cdh4P39038 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh4P39038 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh4P39038 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh4P39038 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh4P39038 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh4P39038 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh4P39038 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh4P39038 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh4P39038 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh4P39038 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh4P39038 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh4P39038 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.09□□□□□ -0.47
Cdh4P39038 Gm43118-201ENSMUST00000199149 775 ntBASIC12.09□□□□□ -0.47
Cdh4P39038 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh4P39038 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh4P39038 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Cdh4P39038 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Cdh4P39038 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh4P39038 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh4P39038 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh4P39038 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh4P39038 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh4P39038 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh4P39038 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh4P39038 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh4P39038 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Cdh4P39038 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.09□□□□□ -0.47
Cdh4P39038 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh4P39038 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh4P39038 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.09□□□□□ -0.47
Cdh4P39038 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Cdh4P39038 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh4P39038 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh4P39038 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh4P39038 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cdh4P39038 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Cdh4P39038 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh4P39038 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh4P39038 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh4P39038 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh4P39038 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.08□□□□□ -0.48
Cdh4P39038 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh4P39038 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.08□□□□□ -0.48
Cdh4P39038 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh4P39038 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh4P39038 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh4P39038 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.08□□□□□ -0.48
Cdh4P39038 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh4P39038 Gm11793-201ENSMUST00000120433 981 ntBASIC12.08□□□□□ -0.48
Cdh4P39038 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh4P39038 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.08□□□□□ -0.48
Cdh4P39038 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh4P39038 Gm16296-201ENSMUST00000159905 325 ntBASIC12.08□□□□□ -0.48
Cdh4P39038 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cdh4P39038 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.08□□□□□ -0.48
Cdh4P39038 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.08□□□□□ -0.48
Cdh4P39038 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Cdh4P39038 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.08□□□□□ -0.48
Cdh4P39038 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh4P39038 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.08□□□□□ -0.48
Cdh4P39038 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.08□□□□□ -0.48
Cdh4P39038 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.08□□□□□ -0.48
Cdh4P39038 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh4P39038 Gm7399-201ENSMUST00000032395 858 ntBASIC12.08□□□□□ -0.48
Cdh4P39038 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Cdh4P39038 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh4P39038 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh4P39038 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Cdh4P39038 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh4P39038 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Cdh4P39038 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Cdh4P39038 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Cdh4P39038 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh4P39038 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh4P39038 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh4P39038 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.08□□□□□ -0.48
Cdh4P39038 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Cdh4P39038 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.08□□□□□ -0.48
Cdh4P39038 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.08□□□□□ -0.48
Cdh4P39038 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.08□□□□□ -0.48
Cdh4P39038 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh4P39038 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms