Protein–RNA interactions for Protein: P35583

Foxa2, Hepatocyte nuclear factor 3-beta, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa2P35583 Retreg1-206ENSMUST00000228306 1430 ntBASIC10.59□□□□□ -0.71
Foxa2P35583 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Foxa2P35583 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Foxa2P35583 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Foxa2P35583 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Foxa2P35583 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Foxa2P35583 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Foxa2P35583 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Foxa2P35583 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Foxa2P35583 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Foxa2P35583 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Foxa2P35583 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Foxa2P35583 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Foxa2P35583 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC10.59□□□□□ -0.71
Foxa2P35583 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Foxa2P35583 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Foxa2P35583 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Foxa2P35583 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Foxa2P35583 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Foxa2P35583 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Foxa2P35583 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC10.59□□□□□ -0.71
Foxa2P35583 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC10.59□□□□□ -0.71
Foxa2P35583 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC10.59□□□□□ -0.71
Foxa2P35583 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Foxa2P35583 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Foxa2P35583 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Foxa2P35583 Gm38092-201ENSMUST00000195600 653 ntBASIC10.59□□□□□ -0.71
Foxa2P35583 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Foxa2P35583 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Foxa2P35583 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Foxa2P35583 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Foxa2P35583 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Foxa2P35583 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Foxa2P35583 Gm15897-201ENSMUST00000117770 1486 ntBASIC10.59□□□□□ -0.71
Foxa2P35583 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Foxa2P35583 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Foxa2P35583 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC10.59□□□□□ -0.71
Foxa2P35583 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC10.59□□□□□ -0.71
Foxa2P35583 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Foxa2P35583 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Foxa2P35583 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Foxa2P35583 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Foxa2P35583 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.59□□□□□ -0.71
Foxa2P35583 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Foxa2P35583 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.59□□□□□ -0.71
Foxa2P35583 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Foxa2P35583 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC10.59□□□□□ -0.71
Foxa2P35583 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Foxa2P35583 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC10.59□□□□□ -0.71
Foxa2P35583 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.71
Foxa2P35583 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Foxa2P35583 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Foxa2P35583 Gm7049-201ENSMUST00000223520 1712 ntBASIC10.58□□□□□ -0.72
Foxa2P35583 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Foxa2P35583 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Foxa2P35583 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Foxa2P35583 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC10.58□□□□□ -0.72
Foxa2P35583 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Foxa2P35583 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Foxa2P35583 Zfp125-201ENSMUST00000079237 2488 ntBASIC10.58□□□□□ -0.72
Foxa2P35583 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Foxa2P35583 Gm5053-201ENSMUST00000208361 1678 ntBASIC10.58□□□□□ -0.72
Foxa2P35583 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Foxa2P35583 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Foxa2P35583 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Foxa2P35583 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC10.58□□□□□ -0.72
Foxa2P35583 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Foxa2P35583 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC10.58□□□□□ -0.72
Foxa2P35583 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC10.58□□□□□ -0.72
Foxa2P35583 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Foxa2P35583 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC10.58□□□□□ -0.72
Foxa2P35583 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Foxa2P35583 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC10.58□□□□□ -0.72
Foxa2P35583 Arhgef33-209ENSMUST00000225223 714 ntBASIC10.58□□□□□ -0.72
Foxa2P35583 AC132317.1-201ENSMUST00000227227 962 ntBASIC10.58□□□□□ -0.72
Foxa2P35583 Nudt18-202ENSMUST00000228554 3619 ntBASIC10.58□□□□□ -0.72
Foxa2P35583 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Foxa2P35583 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Foxa2P35583 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Foxa2P35583 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Foxa2P35583 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Foxa2P35583 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Foxa2P35583 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Foxa2P35583 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Foxa2P35583 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Foxa2P35583 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Foxa2P35583 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Foxa2P35583 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Foxa2P35583 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC10.58□□□□□ -0.72
Foxa2P35583 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Foxa2P35583 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Foxa2P35583 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Foxa2P35583 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Foxa2P35583 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Foxa2P35583 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Foxa2P35583 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC10.58□□□□□ -0.72
Foxa2P35583 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC10.57□□□□□ -0.72
Foxa2P35583 Nupl1-206ENSMUST00000225111 2936 ntBASIC10.57□□□□□ -0.72
Foxa2P35583 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
Foxa2P35583 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms