Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.25□□□□□ -0.45
Hoxc11P31313 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.25□□□□□ -0.45
Hoxc11P31313 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxc11P31313 Gm18056-201ENSMUST00000207670 568 ntBASIC12.25□□□□□ -0.45
Hoxc11P31313 Gm18061-201ENSMUST00000208350 562 ntBASIC12.25□□□□□ -0.45
Hoxc11P31313 Gm18063-201ENSMUST00000208529 568 ntBASIC12.25□□□□□ -0.45
Hoxc11P31313 Gm18052-201ENSMUST00000208750 559 ntBASIC12.25□□□□□ -0.45
Hoxc11P31313 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.25□□□□□ -0.45
Hoxc11P31313 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.25□□□□□ -0.45
Hoxc11P31313 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.25□□□□□ -0.45
Hoxc11P31313 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.25□□□□□ -0.45
Hoxc11P31313 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Hoxc11P31313 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxc11P31313 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Hoxc11P31313 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxc11P31313 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Hoxc11P31313 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxc11P31313 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Hoxc11P31313 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxc11P31313 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxc11P31313 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxc11P31313 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxc11P31313 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxc11P31313 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxc11P31313 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Hoxc11P31313 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxc11P31313 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxc11P31313 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc11P31313 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Hoxc11P31313 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Hoxc11P31313 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc11P31313 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc11P31313 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc11P31313 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Hoxc11P31313 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.24□□□□□ -0.45
Hoxc11P31313 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.24□□□□□ -0.45
Hoxc11P31313 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc11P31313 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.24□□□□□ -0.45
Hoxc11P31313 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc11P31313 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.24□□□□□ -0.45
Hoxc11P31313 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc11P31313 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.24□□□□□ -0.45
Hoxc11P31313 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.24□□□□□ -0.45
Hoxc11P31313 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc11P31313 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc11P31313 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.24□□□□□ -0.45
Hoxc11P31313 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.24□□□□□ -0.45
Hoxc11P31313 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.24□□□□□ -0.45
Hoxc11P31313 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc11P31313 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc11P31313 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc11P31313 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Hoxc11P31313 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc11P31313 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc11P31313 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc11P31313 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc11P31313 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc11P31313 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc11P31313 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc11P31313 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Hoxc11P31313 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc11P31313 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc11P31313 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc11P31313 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc11P31313 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc11P31313 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc11P31313 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc11P31313 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc11P31313 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Hoxc11P31313 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc11P31313 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Hoxc11P31313 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.23□□□□□ -0.45
Hoxc11P31313 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc11P31313 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc11P31313 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc11P31313 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.23□□□□□ -0.45
Hoxc11P31313 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc11P31313 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc11P31313 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc11P31313 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc11P31313 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Hoxc11P31313 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc11P31313 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc11P31313 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Hoxc11P31313 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc11P31313 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.23□□□□□ -0.45
Hoxc11P31313 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc11P31313 Gm13492-201ENSMUST00000119772 665 ntBASIC12.23□□□□□ -0.45
Hoxc11P31313 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc11P31313 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc11P31313 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc11P31313 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.23□□□□□ -0.45
Hoxc11P31313 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc11P31313 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.23□□□□□ -0.45
Hoxc11P31313 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.23□□□□□ -0.45
Hoxc11P31313 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc11P31313 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.23□□□□□ -0.45
Hoxc11P31313 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.23□□□□□ -0.45
Hoxc11P31313 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc11P31313 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms