Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vcam1P29533 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vcam1P29533 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vcam1P29533 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vcam1P29533 Gm18227-201ENSMUST00000211082 1468 ntBASIC14.44□□□□□ -0.1
Vcam1P29533 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vcam1P29533 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vcam1P29533 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vcam1P29533 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
Vcam1P29533 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vcam1P29533 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vcam1P29533 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.43□□□□□ -0.1
Vcam1P29533 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vcam1P29533 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Vcam1P29533 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vcam1P29533 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vcam1P29533 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vcam1P29533 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vcam1P29533 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Vcam1P29533 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vcam1P29533 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.43□□□□□ -0.1
Vcam1P29533 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC14.43□□□□□ -0.1
Vcam1P29533 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC14.43□□□□□ -0.1
Vcam1P29533 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC14.43□□□□□ -0.1
Vcam1P29533 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Vcam1P29533 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vcam1P29533 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC14.43□□□□□ -0.1
Vcam1P29533 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC14.43□□□□□ -0.1
Vcam1P29533 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC14.43□□□□□ -0.1
Vcam1P29533 Gm43962-201ENSMUST00000203898 190 ntBASIC14.43□□□□□ -0.1
Vcam1P29533 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC14.43□□□□□ -0.1
Vcam1P29533 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vcam1P29533 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vcam1P29533 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vcam1P29533 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.43□□□□□ -0.1
Vcam1P29533 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vcam1P29533 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vcam1P29533 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.43□□□□□ -0.1
Vcam1P29533 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Vcam1P29533 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vcam1P29533 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vcam1P29533 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vcam1P29533 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vcam1P29533 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vcam1P29533 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vcam1P29533 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vcam1P29533 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vcam1P29533 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vcam1P29533 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vcam1P29533 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Vcam1P29533 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vcam1P29533 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.42□□□□□ -0.1
Vcam1P29533 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vcam1P29533 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC14.42□□□□□ -0.1
Vcam1P29533 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vcam1P29533 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vcam1P29533 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vcam1P29533 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
Vcam1P29533 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC14.42□□□□□ -0.1
Vcam1P29533 Gm15515-201ENSMUST00000117827 822 ntBASIC14.42□□□□□ -0.1
Vcam1P29533 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC14.42□□□□□ -0.1
Vcam1P29533 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC14.42□□□□□ -0.1
Vcam1P29533 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC14.42□□□□□ -0.1
Vcam1P29533 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vcam1P29533 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Vcam1P29533 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Vcam1P29533 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vcam1P29533 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vcam1P29533 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vcam1P29533 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vcam1P29533 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vcam1P29533 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vcam1P29533 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vcam1P29533 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vcam1P29533 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vcam1P29533 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vcam1P29533 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vcam1P29533 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vcam1P29533 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vcam1P29533 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vcam1P29533 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vcam1P29533 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vcam1P29533 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC14.41□□□□□ -0.1
Vcam1P29533 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC14.41□□□□□ -0.1
Vcam1P29533 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC14.41□□□□□ -0.1
Vcam1P29533 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC14.41□□□□□ -0.1
Vcam1P29533 Gm23699-201ENSMUST00000158835 135 ntBASIC14.41□□□□□ -0.1
Vcam1P29533 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC14.41□□□□□ -0.1
Vcam1P29533 Gm43378-201ENSMUST00000199336 582 ntBASIC14.41□□□□□ -0.1
Vcam1P29533 Gm42997-202ENSMUST00000200321 985 ntBASIC14.41□□□□□ -0.1
Vcam1P29533 Gm9555-201ENSMUST00000200908 583 ntBASIC14.41□□□□□ -0.1
Vcam1P29533 Gm44100-201ENSMUST00000204329 436 ntBASIC14.41□□□□□ -0.1
Vcam1P29533 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC14.41□□□□□ -0.1
Vcam1P29533 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vcam1P29533 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC14.41□□□□□ -0.1
Vcam1P29533 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vcam1P29533 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC14.41□□□□□ -0.1
Vcam1P29533 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vcam1P29533 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Vcam1P29533 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms