Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sdc1P18828 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sdc1P18828 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sdc1P18828 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC10.3□□□□□ -0.76
Sdc1P18828 Gm21038-201ENSMUST00000222205 1383 ntBASIC10.3□□□□□ -0.76
Sdc1P18828 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sdc1P18828 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sdc1P18828 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sdc1P18828 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sdc1P18828 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.3□□□□□ -0.76
Sdc1P18828 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sdc1P18828 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sdc1P18828 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sdc1P18828 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sdc1P18828 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC10.3□□□□□ -0.76
Sdc1P18828 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC10.3□□□□□ -0.76
Sdc1P18828 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC10.3□□□□□ -0.76
Sdc1P18828 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sdc1P18828 Gm9824-201ENSMUST00000178707 561 ntBASIC10.3□□□□□ -0.76
Sdc1P18828 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
Sdc1P18828 Gm18766-201ENSMUST00000189811 808 ntBASIC10.3□□□□□ -0.76
Sdc1P18828 Gm38144-201ENSMUST00000192790 465 ntBASIC10.3□□□□□ -0.76
Sdc1P18828 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sdc1P18828 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sdc1P18828 AC154222.1-201ENSMUST00000223882 475 ntBASIC10.3□□□□□ -0.76
Sdc1P18828 Gm10819-201ENSMUST00000099988 561 ntBASIC10.3□□□□□ -0.76
Sdc1P18828 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Sdc1P18828 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sdc1P18828 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC10.3□□□□□ -0.76
Sdc1P18828 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sdc1P18828 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC10.3□□□□□ -0.76
Sdc1P18828 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sdc1P18828 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sdc1P18828 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sdc1P18828 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sdc1P18828 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sdc1P18828 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Sdc1P18828 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC10.3□□□□□ -0.76
Sdc1P18828 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sdc1P18828 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sdc1P18828 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC10.3□□□□□ -0.76
Sdc1P18828 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sdc1P18828 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sdc1P18828 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sdc1P18828 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sdc1P18828 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sdc1P18828 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sdc1P18828 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sdc1P18828 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC10.3□□□□□ -0.76
Sdc1P18828 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Sdc1P18828 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sdc1P18828 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sdc1P18828 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sdc1P18828 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sdc1P18828 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sdc1P18828 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sdc1P18828 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sdc1P18828 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sdc1P18828 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sdc1P18828 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sdc1P18828 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sdc1P18828 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sdc1P18828 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Sdc1P18828 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sdc1P18828 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sdc1P18828 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sdc1P18828 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sdc1P18828 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sdc1P18828 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sdc1P18828 Gm42690-201ENSMUST00000197921 1836 ntBASIC10.29□□□□□ -0.76
Sdc1P18828 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sdc1P18828 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sdc1P18828 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC10.29□□□□□ -0.76
Sdc1P18828 Gm14140-201ENSMUST00000119999 995 ntBASIC10.29□□□□□ -0.76
Sdc1P18828 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC10.29□□□□□ -0.76
Sdc1P18828 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sdc1P18828 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC10.29□□□□□ -0.76
Sdc1P18828 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sdc1P18828 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Sdc1P18828 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC10.29□□□□□ -0.76
Sdc1P18828 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC10.29□□□□□ -0.76
Sdc1P18828 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sdc1P18828 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sdc1P18828 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sdc1P18828 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sdc1P18828 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sdc1P18828 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sdc1P18828 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sdc1P18828 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sdc1P18828 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sdc1P18828 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sdc1P18828 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sdc1P18828 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sdc1P18828 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC10.29□□□□□ -0.76
Sdc1P18828 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sdc1P18828 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.29□□□□□ -0.76
Sdc1P18828 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sdc1P18828 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Sdc1P18828 Gm6018-201ENSMUST00000216090 1306 ntBASIC10.29□□□□□ -0.76
Sdc1P18828 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC10.29□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms