Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
UbbP0CG49 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
UbbP0CG49 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
UbbP0CG49 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
UbbP0CG49 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
UbbP0CG49 Gm44758-201ENSMUST00000206096 2068 ntBASIC10.98□□□□□ -0.65
UbbP0CG49 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
UbbP0CG49 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
UbbP0CG49 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
UbbP0CG49 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC10.98□□□□□ -0.65
UbbP0CG49 Gm12151-201ENSMUST00000121374 290 ntBASIC10.98□□□□□ -0.65
UbbP0CG49 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
UbbP0CG49 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
UbbP0CG49 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC10.98□□□□□ -0.65
UbbP0CG49 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC10.98□□□□□ -0.65
UbbP0CG49 Gm18916-201ENSMUST00000198264 1246 ntBASIC10.98□□□□□ -0.65
UbbP0CG49 Gm44064-201ENSMUST00000204964 1087 ntBASIC10.98□□□□□ -0.65
UbbP0CG49 Gm44872-201ENSMUST00000207864 420 ntBASIC10.98□□□□□ -0.65
UbbP0CG49 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
UbbP0CG49 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
UbbP0CG49 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
UbbP0CG49 Gm26035-201ENSMUST00000083065 308 ntBASIC10.98□□□□□ -0.65
UbbP0CG49 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
UbbP0CG49 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.98□□□□□ -0.65
UbbP0CG49 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
UbbP0CG49 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
UbbP0CG49 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
UbbP0CG49 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
UbbP0CG49 Gm38049-201ENSMUST00000195698 1372 ntBASIC10.98□□□□□ -0.65
UbbP0CG49 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
UbbP0CG49 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
UbbP0CG49 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC10.98□□□□□ -0.65
UbbP0CG49 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
UbbP0CG49 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
UbbP0CG49 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
UbbP0CG49 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC10.98□□□□□ -0.65
UbbP0CG49 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
UbbP0CG49 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
UbbP0CG49 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
UbbP0CG49 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
UbbP0CG49 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC10.98□□□□□ -0.65
UbbP0CG49 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
UbbP0CG49 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
UbbP0CG49 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
UbbP0CG49 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
UbbP0CG49 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
UbbP0CG49 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
UbbP0CG49 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
UbbP0CG49 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC10.97□□□□□ -0.65
UbbP0CG49 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
UbbP0CG49 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
UbbP0CG49 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
UbbP0CG49 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
UbbP0CG49 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
UbbP0CG49 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
UbbP0CG49 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
UbbP0CG49 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC10.97□□□□□ -0.65
UbbP0CG49 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
UbbP0CG49 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
UbbP0CG49 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
UbbP0CG49 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC10.97□□□□□ -0.65
UbbP0CG49 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
UbbP0CG49 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC10.97□□□□□ -0.65
UbbP0CG49 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
UbbP0CG49 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC10.97□□□□□ -0.65
UbbP0CG49 Gm42612-201ENSMUST00000197986 623 ntBASIC10.97□□□□□ -0.65
UbbP0CG49 Gm43170-201ENSMUST00000199827 612 ntBASIC10.97□□□□□ -0.65
UbbP0CG49 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC10.97□□□□□ -0.65
UbbP0CG49 AC124732.1-201ENSMUST00000221551 910 ntBASIC10.97□□□□□ -0.65
UbbP0CG49 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC10.97□□□□□ -0.65
UbbP0CG49 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
UbbP0CG49 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
UbbP0CG49 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
UbbP0CG49 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
UbbP0CG49 Gm3365-201ENSMUST00000216296 1480 ntBASIC10.97□□□□□ -0.65
UbbP0CG49 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
UbbP0CG49 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
UbbP0CG49 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.97□□□□□ -0.65
UbbP0CG49 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
UbbP0CG49 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
UbbP0CG49 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
UbbP0CG49 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
UbbP0CG49 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
UbbP0CG49 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
UbbP0CG49 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
UbbP0CG49 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
UbbP0CG49 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
UbbP0CG49 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
UbbP0CG49 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
UbbP0CG49 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
UbbP0CG49 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
UbbP0CG49 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
UbbP0CG49 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
UbbP0CG49 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
UbbP0CG49 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
UbbP0CG49 Gm43727-201ENSMUST00000198021 2647 ntBASIC10.96□□□□□ -0.65
UbbP0CG49 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
UbbP0CG49 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
UbbP0CG49 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
UbbP0CG49 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms