Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hoxc9P09633 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Hoxc9P09633 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hoxc9P09633 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hoxc9P09633 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Hoxc9P09633 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hoxc9P09633 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hoxc9P09633 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hoxc9P09633 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hoxc9P09633 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hoxc9P09633 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hoxc9P09633 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Hoxc9P09633 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Hoxc9P09633 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hoxc9P09633 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Hoxc9P09633 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hoxc9P09633 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC16.24■□□□□ 0.19
Hoxc9P09633 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Hoxc9P09633 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC16.24■□□□□ 0.19
Hoxc9P09633 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Hoxc9P09633 Gm15432-201ENSMUST00000121106 195 ntBASIC16.24■□□□□ 0.19
Hoxc9P09633 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC16.24■□□□□ 0.19
Hoxc9P09633 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Hoxc9P09633 Gm5733-201ENSMUST00000190232 939 ntBASIC16.24■□□□□ 0.19
Hoxc9P09633 AC125486.1-201ENSMUST00000218701 320 ntBASIC16.24■□□□□ 0.19
Hoxc9P09633 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hoxc9P09633 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hoxc9P09633 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hoxc9P09633 Gm26035-201ENSMUST00000083065 308 ntBASIC16.24■□□□□ 0.19
Hoxc9P09633 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Hoxc9P09633 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC16.24■□□□□ 0.19
Hoxc9P09633 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hoxc9P09633 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hoxc9P09633 AC238940.1-201ENSMUST00000225106 1858 ntBASIC16.24■□□□□ 0.19
Hoxc9P09633 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Hoxc9P09633 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Hoxc9P09633 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hoxc9P09633 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Hoxc9P09633 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hoxc9P09633 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hoxc9P09633 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hoxc9P09633 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hoxc9P09633 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Hoxc9P09633 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Hoxc9P09633 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC16.23■□□□□ 0.19
Hoxc9P09633 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Hoxc9P09633 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hoxc9P09633 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Hoxc9P09633 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hoxc9P09633 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Hoxc9P09633 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hoxc9P09633 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Hoxc9P09633 Gm42682-201ENSMUST00000198349 1265 ntBASIC16.23■□□□□ 0.19
Hoxc9P09633 Gm4482-201ENSMUST00000200876 742 ntBASIC16.23■□□□□ 0.19
Hoxc9P09633 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hoxc9P09633 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hoxc9P09633 Gm8285-201ENSMUST00000208293 759 ntBASIC16.23■□□□□ 0.19
Hoxc9P09633 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hoxc9P09633 AC141438.2-201ENSMUST00000215068 271 ntBASIC16.23■□□□□ 0.19
Hoxc9P09633 AC166992.1-201ENSMUST00000216356 565 ntBASIC16.23■□□□□ 0.19
Hoxc9P09633 AC154849.4-201ENSMUST00000224868 365 ntBASIC16.23■□□□□ 0.19
Hoxc9P09633 AC135114.1-201ENSMUST00000228682 270 ntBASIC16.23■□□□□ 0.19
Hoxc9P09633 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC16.23■□□□□ 0.19
Hoxc9P09633 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hoxc9P09633 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hoxc9P09633 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hoxc9P09633 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Hoxc9P09633 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hoxc9P09633 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hoxc9P09633 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hoxc9P09633 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hoxc9P09633 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hoxc9P09633 Gm28719-201ENSMUST00000187779 1757 ntBASIC16.23■□□□□ 0.19
Hoxc9P09633 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hoxc9P09633 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hoxc9P09633 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hoxc9P09633 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Hoxc9P09633 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC16.22■□□□□ 0.19
Hoxc9P09633 Zkscan3-207ENSMUST00000223831 2101 ntBASIC16.22■□□□□ 0.19
Hoxc9P09633 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Hoxc9P09633 Gm5847-201ENSMUST00000178959 1595 ntBASIC16.22■□□□□ 0.19
Hoxc9P09633 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Hoxc9P09633 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Hoxc9P09633 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hoxc9P09633 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hoxc9P09633 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Hoxc9P09633 Gm7722-201ENSMUST00000120646 741 ntBASIC16.22■□□□□ 0.19
Hoxc9P09633 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC16.22■□□□□ 0.19
Hoxc9P09633 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC16.22■□□□□ 0.19
Hoxc9P09633 Gm37246-201ENSMUST00000192665 835 ntBASIC16.22■□□□□ 0.19
Hoxc9P09633 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Hoxc9P09633 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC16.22■□□□□ 0.19
Hoxc9P09633 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hoxc9P09633 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hoxc9P09633 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hoxc9P09633 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hoxc9P09633 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hoxc9P09633 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Hoxc9P09633 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hoxc9P09633 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms