Protein–RNA interactions for Protein: P09084

Pax1, Paired box protein Pax-1, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pax1P09084 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Pax1P09084 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Pax1P09084 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pax1P09084 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pax1P09084 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pax1P09084 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Pax1P09084 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pax1P09084 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pax1P09084 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pax1P09084 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pax1P09084 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pax1P09084 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Pax1P09084 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pax1P09084 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Pax1P09084 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Pax1P09084 Mir1192-201ENSMUST00000116976 121 ntBASIC10.41□□□□□ -0.74
Pax1P09084 Gm12507-201ENSMUST00000119155 415 ntBASIC10.41□□□□□ -0.74
Pax1P09084 Pbdc1-202ENSMUST00000119477 1239 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Pax1P09084 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
Pax1P09084 Gm14152-201ENSMUST00000127020 1073 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Pax1P09084 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Pax1P09084 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC10.41□□□□□ -0.74
Pax1P09084 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC10.41□□□□□ -0.74
Pax1P09084 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pax1P09084 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Pax1P09084 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Pax1P09084 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pax1P09084 Gm44799-201ENSMUST00000207639 1202 ntBASIC10.41□□□□□ -0.74
Pax1P09084 AC073947.2-201ENSMUST00000215888 1130 ntBASIC10.41□□□□□ -0.74
Pax1P09084 AC238811.1-201ENSMUST00000225302 441 ntBASIC10.41□□□□□ -0.74
Pax1P09084 AC154595.1-201ENSMUST00000225533 1059 ntBASIC10.41□□□□□ -0.74
Pax1P09084 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pax1P09084 Ifnb1-201ENSMUST00000055671 750 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Pax1P09084 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Pax1P09084 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pax1P09084 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC10.41□□□□□ -0.74
Pax1P09084 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Pax1P09084 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pax1P09084 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC10.41□□□□□ -0.74
Pax1P09084 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pax1P09084 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pax1P09084 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Pax1P09084 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pax1P09084 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pax1P09084 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pax1P09084 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC10.41□□□□□ -0.74
Pax1P09084 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pax1P09084 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Pax1P09084 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Pax1P09084 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC10.41□□□□□ -0.74
Pax1P09084 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pax1P09084 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.74
Pax1P09084 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Pax1P09084 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pax1P09084 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pax1P09084 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pax1P09084 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pax1P09084 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Pax1P09084 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Pax1P09084 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pax1P09084 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
Pax1P09084 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Pax1P09084 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pax1P09084 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Pax1P09084 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pax1P09084 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pax1P09084 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pax1P09084 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pax1P09084 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC10.4□□□□□ -0.74
Pax1P09084 Gm15376-201ENSMUST00000122258 783 ntBASIC10.4□□□□□ -0.74
Pax1P09084 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Pax1P09084 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC10.4□□□□□ -0.74
Pax1P09084 Gm26464-201ENSMUST00000157094 305 ntBASIC10.4□□□□□ -0.74
Pax1P09084 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pax1P09084 Gm9522-201ENSMUST00000182394 926 ntBASIC10.4□□□□□ -0.74
Pax1P09084 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC10.4□□□□□ -0.74
Pax1P09084 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC10.4□□□□□ -0.74
Pax1P09084 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Pax1P09084 AC154730.1-201ENSMUST00000227874 816 ntBASIC10.4□□□□□ -0.74
Pax1P09084 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pax1P09084 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pax1P09084 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pax1P09084 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Pax1P09084 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pax1P09084 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Pax1P09084 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pax1P09084 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pax1P09084 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Pax1P09084 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pax1P09084 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Pax1P09084 Gm39526-201ENSMUST00000208925 1413 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Pax1P09084 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Pax1P09084 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Pax1P09084 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Pax1P09084 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Pax1P09084 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Pax1P09084 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Pax1P09084 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Pax1P09084 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Pax1P09084 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms