Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.67□□□□□ -0.38
Hoxb3P09026 AC136019.1-201ENSMUST00000226503 1412 ntBASIC12.67□□□□□ -0.38
Hoxb3P09026 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxb3P09026 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxb3P09026 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Hoxb3P09026 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Hoxb3P09026 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxb3P09026 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxb3P09026 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxb3P09026 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxb3P09026 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Hoxb3P09026 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxb3P09026 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxb3P09026 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxb3P09026 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.67□□□□□ -0.38
Hoxb3P09026 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxb3P09026 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxb3P09026 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxb3P09026 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxb3P09026 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxb3P09026 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxb3P09026 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxb3P09026 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxb3P09026 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.66□□□□□ -0.38
Hoxb3P09026 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxb3P09026 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxb3P09026 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxb3P09026 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxb3P09026 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxb3P09026 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxb3P09026 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Hoxb3P09026 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxb3P09026 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxb3P09026 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxb3P09026 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxb3P09026 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxb3P09026 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Hoxb3P09026 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxb3P09026 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.66□□□□□ -0.38
Hoxb3P09026 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC12.66□□□□□ -0.38
Hoxb3P09026 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxb3P09026 Gm4862-201ENSMUST00000170405 438 ntBASIC12.66□□□□□ -0.38
Hoxb3P09026 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Hoxb3P09026 Gm26956-201ENSMUST00000182176 986 ntBASIC12.66□□□□□ -0.38
Hoxb3P09026 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.66□□□□□ -0.38
Hoxb3P09026 Gm7848-201ENSMUST00000210739 718 ntBASIC12.66□□□□□ -0.38
Hoxb3P09026 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxb3P09026 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxb3P09026 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxb3P09026 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxb3P09026 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.66□□□□□ -0.38
Hoxb3P09026 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxb3P09026 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxb3P09026 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxb3P09026 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.66□□□□□ -0.38
Hoxb3P09026 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxb3P09026 Gm42479-201ENSMUST00000198654 1356 ntBASIC12.66□□□□□ -0.38
Hoxb3P09026 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxb3P09026 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxb3P09026 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxb3P09026 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxb3P09026 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxb3P09026 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxb3P09026 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Hoxb3P09026 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxb3P09026 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.65□□□□□ -0.38
Hoxb3P09026 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxb3P09026 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxb3P09026 Gm5403-201ENSMUST00000117105 2795 ntBASIC12.65□□□□□ -0.38
Hoxb3P09026 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxb3P09026 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.65□□□□□ -0.38
Hoxb3P09026 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxb3P09026 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxb3P09026 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxb3P09026 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Hoxb3P09026 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxb3P09026 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxb3P09026 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.65□□□□□ -0.38
Hoxb3P09026 Mir874-201ENSMUST00000104769 76 ntBASIC12.65□□□□□ -0.38
Hoxb3P09026 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxb3P09026 Gm13255-201ENSMUST00000117255 547 ntBASIC12.65□□□□□ -0.38
Hoxb3P09026 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC12.65□□□□□ -0.38
Hoxb3P09026 Ackr1-202ENSMUST00000194046 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxb3P09026 Gm38092-201ENSMUST00000195600 653 ntBASIC12.65□□□□□ -0.38
Hoxb3P09026 Gm45481-201ENSMUST00000209717 877 ntBASIC12.65□□□□□ -0.38
Hoxb3P09026 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC12.65□□□□□ -0.38
Hoxb3P09026 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.65□□□□□ -0.38
Hoxb3P09026 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.65□□□□□ -0.38
Hoxb3P09026 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxb3P09026 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.65□□□□□ -0.38
Hoxb3P09026 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Hoxb3P09026 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.65□□□□□ -0.38
Hoxb3P09026 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxb3P09026 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxb3P09026 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxb3P09026 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxb3P09026 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxb3P09026 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxb3P09026 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxb3P09026 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms