Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.34□□□□□ -0.27
Hoxc8P09025 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.34□□□□□ -0.27
Hoxc8P09025 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc8P09025 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Hoxc8P09025 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc8P09025 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc8P09025 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC13.33□□□□□ -0.27
Hoxc8P09025 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Hoxc8P09025 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxc8P09025 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Hoxc8P09025 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxc8P09025 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxc8P09025 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Hoxc8P09025 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxc8P09025 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Hoxc8P09025 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Hoxc8P09025 Gm8566-201ENSMUST00000120174 465 ntBASIC13.33□□□□□ -0.28
Hoxc8P09025 Gm13461-201ENSMUST00000120980 662 ntBASIC13.33□□□□□ -0.28
Hoxc8P09025 Gm15432-201ENSMUST00000121106 195 ntBASIC13.33□□□□□ -0.28
Hoxc8P09025 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC13.33□□□□□ -0.28
Hoxc8P09025 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Hoxc8P09025 Gm44551-201ENSMUST00000208804 171 ntBASIC13.33□□□□□ -0.28
Hoxc8P09025 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC13.33□□□□□ -0.28
Hoxc8P09025 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxc8P09025 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC13.33□□□□□ -0.28
Hoxc8P09025 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC13.33□□□□□ -0.28
Hoxc8P09025 Gm807-202ENSMUST00000224929 408 ntBASIC13.33□□□□□ -0.28
Hoxc8P09025 Gm1821-202ENSMUST00000227415 750 ntBASIC13.33□□□□□ -0.28
Hoxc8P09025 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Hoxc8P09025 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.33□□□□□ -0.28
Hoxc8P09025 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxc8P09025 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxc8P09025 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxc8P09025 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxc8P09025 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxc8P09025 Gm9072-201ENSMUST00000218390 1514 ntBASIC13.33□□□□□ -0.28
Hoxc8P09025 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Hoxc8P09025 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxc8P09025 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxc8P09025 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxc8P09025 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxc8P09025 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxc8P09025 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc8P09025 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc8P09025 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc8P09025 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc8P09025 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc8P09025 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc8P09025 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc8P09025 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc8P09025 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc8P09025 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc8P09025 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc8P09025 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc8P09025 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc8P09025 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc8P09025 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.32□□□□□ -0.28
Hoxc8P09025 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Hoxc8P09025 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc8P09025 Gm44999-201ENSMUST00000207456 1493 ntBASIC13.32□□□□□ -0.28
Hoxc8P09025 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc8P09025 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
Hoxc8P09025 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC13.32□□□□□ -0.28
Hoxc8P09025 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC13.32□□□□□ -0.28
Hoxc8P09025 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC13.32□□□□□ -0.28
Hoxc8P09025 Gm10051-201ENSMUST00000145209 414 ntBASIC13.32□□□□□ -0.28
Hoxc8P09025 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc8P09025 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Hoxc8P09025 Mir6546-201ENSMUST00000184460 62 ntBASIC13.32□□□□□ -0.28
Hoxc8P09025 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc8P09025 Gm44126-201ENSMUST00000204831 514 ntBASIC13.32□□□□□ -0.28
Hoxc8P09025 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc8P09025 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc8P09025 Ginm1-202ENSMUST00000065124 300 ntBASIC13.32□□□□□ -0.28
Hoxc8P09025 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Hoxc8P09025 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Hoxc8P09025 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Hoxc8P09025 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc8P09025 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc8P09025 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc8P09025 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc8P09025 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc8P09025 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc8P09025 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc8P09025 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc8P09025 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc8P09025 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc8P09025 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc8P09025 Gm18782-201ENSMUST00000209023 1399 ntBASIC13.32□□□□□ -0.28
Hoxc8P09025 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc8P09025 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxc8P09025 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxc8P09025 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxc8P09025 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.31□□□□□ -0.28
Hoxc8P09025 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxc8P09025 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxc8P09025 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxc8P09025 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxc8P09025 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Hoxc8P09025 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms