Protein–RNA interactions for Protein: P04945

Ig kappa chain V-VI region NQ2-6.1, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04945 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
P04945 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P04945 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
P04945 Gm8602-201ENSMUST00000184045 607 ntBASIC10.79□□□□□ -0.68
P04945 AC098716.1-201ENSMUST00000213527 703 ntBASIC10.79□□□□□ -0.68
P04945 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC10.79□□□□□ -0.68
P04945 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
P04945 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P04945 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
P04945 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
P04945 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
P04945 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P04945 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
P04945 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC10.79□□□□□ -0.68
P04945 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
P04945 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P04945 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P04945 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
P04945 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
P04945 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P04945 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC10.79□□□□□ -0.68
P04945 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P04945 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC10.78□□□□□ -0.68
P04945 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P04945 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
P04945 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P04945 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P04945 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.78□□□□□ -0.68
P04945 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
P04945 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P04945 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.78□□□□□ -0.68
P04945 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P04945 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC10.78□□□□□ -0.68
P04945 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC10.78□□□□□ -0.68
P04945 Gm14660-201ENSMUST00000119809 575 ntBASIC10.78□□□□□ -0.68
P04945 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P04945 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC10.78□□□□□ -0.68
P04945 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P04945 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P04945 Gm23119-201ENSMUST00000158610 140 ntBASIC10.78□□□□□ -0.68
P04945 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P04945 Gm16379-201ENSMUST00000161469 348 ntBASIC10.78□□□□□ -0.68
P04945 Gm6222-202ENSMUST00000182143 629 ntBASIC10.78□□□□□ -0.68
P04945 Gm3890-201ENSMUST00000182416 207 ntBASIC10.78□□□□□ -0.68
P04945 Gm8762-201ENSMUST00000193486 339 ntBASIC10.78□□□□□ -0.68
P04945 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC10.78□□□□□ -0.68
P04945 AC108416.1-202ENSMUST00000228927 1201 ntBASIC10.78□□□□□ -0.68
P04945 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P04945 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P04945 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
P04945 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P04945 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
P04945 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
P04945 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P04945 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
P04945 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P04945 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P04945 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC10.78□□□□□ -0.68
P04945 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
P04945 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
P04945 Gm3287-205ENSMUST00000228893 1332 ntBASIC10.78□□□□□ -0.68
P04945 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
P04945 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P04945 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P04945 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P04945 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC10.78□□□□□ -0.68
P04945 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P04945 Gm44086-201ENSMUST00000203251 2349 ntBASIC10.78□□□□□ -0.68
P04945 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC10.78□□□□□ -0.68
P04945 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P04945 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
P04945 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC10.77□□□□□ -0.68
P04945 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
P04945 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
P04945 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC10.77□□□□□ -0.68
P04945 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
P04945 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
P04945 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
P04945 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
P04945 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
P04945 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
P04945 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
P04945 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
P04945 Gm5884-201ENSMUST00000036712 1479 ntBASIC10.77□□□□□ -0.69
P04945 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
P04945 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
P04945 Gm13226-201ENSMUST00000117838 404 ntBASIC10.77□□□□□ -0.69
P04945 Gm12314-201ENSMUST00000118104 538 ntBASIC10.77□□□□□ -0.69
P04945 Gm13315-201ENSMUST00000120376 991 ntBASIC10.77□□□□□ -0.69
P04945 Gm11597-201ENSMUST00000121423 964 ntBASIC10.77□□□□□ -0.69
P04945 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC10.77□□□□□ -0.69
P04945 Gm7809-201ENSMUST00000153199 742 ntBASIC10.77□□□□□ -0.69
P04945 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC10.77□□□□□ -0.69
P04945 Gm8835-201ENSMUST00000173096 1169 ntBASIC10.77□□□□□ -0.69
P04945 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC10.77□□□□□ -0.69
P04945 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC10.77□□□□□ -0.69
P04945 Gm9022-201ENSMUST00000182482 992 ntBASIC10.77□□□□□ -0.69
P04945 Gm27243-201ENSMUST00000183964 521 ntBASIC10.77□□□□□ -0.69
P04945 Gm7063-201ENSMUST00000186840 981 ntBASIC10.77□□□□□ -0.69
P04945 Ighv1-60-201ENSMUST00000195816 405 ntBASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms