Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04224 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
P04224 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.09□□□□□ -0.63
P04224 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04224 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04224 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04224 Gm4204-201ENSMUST00000110798 1231 ntBASIC11.09□□□□□ -0.63
P04224 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.09□□□□□ -0.63
P04224 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P04224 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.09□□□□□ -0.63
P04224 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC11.09□□□□□ -0.63
P04224 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P04224 Gm27321-201ENSMUST00000185021 205 ntBASIC11.09□□□□□ -0.63
P04224 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04224 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P04224 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.09□□□□□ -0.63
P04224 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04224 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04224 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.09□□□□□ -0.63
P04224 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04224 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04224 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04224 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
P04224 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
P04224 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
P04224 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04224 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04224 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04224 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04224 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P04224 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P04224 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
P04224 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04224 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.09□□□□□ -0.63
P04224 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04224 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.09□□□□□ -0.63
P04224 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P04224 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
P04224 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04224 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
P04224 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.08□□□□□ -0.63
P04224 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
P04224 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.63
P04224 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
P04224 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P04224 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
P04224 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
P04224 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.08□□□□□ -0.64
P04224 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
P04224 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P04224 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
P04224 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P04224 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.08□□□□□ -0.64
P04224 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC11.08□□□□□ -0.64
P04224 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P04224 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P04224 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P04224 Gm4875-201ENSMUST00000118257 786 ntBASIC11.08□□□□□ -0.64
P04224 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC11.08□□□□□ -0.64
P04224 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
P04224 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P04224 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
P04224 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC11.08□□□□□ -0.64
P04224 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P04224 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P04224 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P04224 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P04224 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P04224 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
P04224 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC11.08□□□□□ -0.64
P04224 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
P04224 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P04224 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.08□□□□□ -0.64
P04224 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P04224 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC11.08□□□□□ -0.64
P04224 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.08□□□□□ -0.64
P04224 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
P04224 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P04224 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
P04224 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P04224 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P04224 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.08□□□□□ -0.64
P04224 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P04224 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P04224 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
P04224 Daam2-202ENSMUST00000224595 1926 ntBASIC11.07□□□□□ -0.64
P04224 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P04224 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
P04224 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
P04224 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.07□□□□□ -0.64
P04224 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
P04224 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P04224 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P04224 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC11.07□□□□□ -0.64
P04224 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
P04224 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
P04224 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
P04224 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P04224 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.07□□□□□ -0.64
P04224 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms