Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC15.19■□□□□ 0.02
Col4a1P02463 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC15.19■□□□□ 0.02
Col4a1P02463 CT030637.1-201ENSMUST00000228016 669 ntBASIC15.19■□□□□ 0.02
Col4a1P02463 AC171241.1-201ENSMUST00000228144 1166 ntBASIC15.19■□□□□ 0.02
Col4a1P02463 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col4a1P02463 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Col4a1P02463 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col4a1P02463 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col4a1P02463 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC15.19■□□□□ 0.02
Col4a1P02463 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Col4a1P02463 Gm37644-201ENSMUST00000192190 2270 ntBASIC15.19■□□□□ 0.02
Col4a1P02463 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col4a1P02463 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col4a1P02463 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col4a1P02463 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col4a1P02463 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Col4a1P02463 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Col4a1P02463 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col4a1P02463 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col4a1P02463 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col4a1P02463 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col4a1P02463 Gm11511-201ENSMUST00000118146 540 ntBASIC15.19■□□□□ 0.02
Col4a1P02463 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC15.19■□□□□ 0.02
Col4a1P02463 Gm18893-201ENSMUST00000198416 943 ntBASIC15.19■□□□□ 0.02
Col4a1P02463 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col4a1P02463 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Col4a1P02463 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Col4a1P02463 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC15.18■□□□□ 0.02
Col4a1P02463 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Col4a1P02463 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col4a1P02463 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
Col4a1P02463 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Col4a1P02463 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Col4a1P02463 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col4a1P02463 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.18■□□□□ 0.02
Col4a1P02463 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Col4a1P02463 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col4a1P02463 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col4a1P02463 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Col4a1P02463 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col4a1P02463 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col4a1P02463 n-R5s64-201ENSMUST00000102019 119 ntBASIC15.18■□□□□ 0.02
Col4a1P02463 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC15.18■□□□□ 0.02
Col4a1P02463 Gm13888-201ENSMUST00000119148 422 ntBASIC15.18■□□□□ 0.02
Col4a1P02463 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC15.18■□□□□ 0.02
Col4a1P02463 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Col4a1P02463 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Col4a1P02463 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col4a1P02463 Gm2965-201ENSMUST00000198365 343 ntBASIC15.18■□□□□ 0.02
Col4a1P02463 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col4a1P02463 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Col4a1P02463 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col4a1P02463 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col4a1P02463 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Col4a1P02463 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Col4a1P02463 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC15.18■□□□□ 0.02
Col4a1P02463 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col4a1P02463 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col4a1P02463 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Col4a1P02463 AC154747.3-201ENSMUST00000224471 3470 ntBASIC15.17■□□□□ 0.02
Col4a1P02463 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col4a1P02463 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col4a1P02463 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col4a1P02463 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col4a1P02463 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Col4a1P02463 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Col4a1P02463 Gm22711-201ENSMUST00000116890 133 ntBASIC15.17■□□□□ 0.02
Col4a1P02463 Selenot-ps-201ENSMUST00000119098 593 ntBASIC15.17■□□□□ 0.02
Col4a1P02463 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC15.17■□□□□ 0.02
Col4a1P02463 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Col4a1P02463 Gm8956-201ENSMUST00000203939 825 ntBASIC15.17■□□□□ 0.02
Col4a1P02463 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col4a1P02463 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC15.17■□□□□ 0.02
Col4a1P02463 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col4a1P02463 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col4a1P02463 AC154262.2-202ENSMUST00000225158 1331 ntBASIC15.17■□□□□ 0.02
Col4a1P02463 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col4a1P02463 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Col4a1P02463 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC15.17■□□□□ 0.02
Col4a1P02463 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col4a1P02463 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col4a1P02463 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Col4a1P02463 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Col4a1P02463 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC15.17■□□□□ 0.02
Col4a1P02463 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col4a1P02463 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Col4a1P02463 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Col4a1P02463 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col4a1P02463 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col4a1P02463 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Col4a1P02463 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col4a1P02463 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col4a1P02463 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col4a1P02463 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col4a1P02463 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col4a1P02463 Gm4726-201ENSMUST00000135604 736 ntBASIC15.16■□□□□ 0.02
Col4a1P02463 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC15.16■□□□□ 0.02
Col4a1P02463 Gm6019-201ENSMUST00000148369 736 ntBASIC15.16■□□□□ 0.02
Col4a1P02463 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Col4a1P02463 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms