Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
IghmP01872 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
IghmP01872 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.8□□□□□ -0.52
IghmP01872 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
IghmP01872 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
IghmP01872 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
IghmP01872 Rmrp-201ENSMUST00000157463 271 ntBASIC11.8□□□□□ -0.52
IghmP01872 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC11.8□□□□□ -0.52
IghmP01872 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
IghmP01872 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
IghmP01872 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.8□□□□□ -0.52
IghmP01872 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.8□□□□□ -0.52
IghmP01872 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
IghmP01872 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
IghmP01872 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
IghmP01872 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
IghmP01872 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.8□□□□□ -0.52
IghmP01872 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
IghmP01872 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
IghmP01872 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
IghmP01872 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.8□□□□□ -0.52
IghmP01872 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
IghmP01872 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.8□□□□□ -0.52
IghmP01872 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.8□□□□□ -0.52
IghmP01872 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
IghmP01872 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
IghmP01872 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
IghmP01872 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
IghmP01872 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
IghmP01872 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.79□□□□□ -0.52
IghmP01872 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
IghmP01872 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
IghmP01872 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
IghmP01872 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
IghmP01872 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
IghmP01872 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
IghmP01872 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
IghmP01872 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
IghmP01872 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
IghmP01872 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
IghmP01872 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
IghmP01872 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
IghmP01872 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
IghmP01872 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.79□□□□□ -0.52
IghmP01872 Gm24136-201ENSMUST00000083374 165 ntBASIC11.79□□□□□ -0.52
IghmP01872 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
IghmP01872 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
IghmP01872 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
IghmP01872 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
IghmP01872 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
IghmP01872 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.79□□□□□ -0.52
IghmP01872 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
IghmP01872 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
IghmP01872 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.79□□□□□ -0.52
IghmP01872 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.79□□□□□ -0.52
IghmP01872 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
IghmP01872 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
IghmP01872 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
IghmP01872 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
IghmP01872 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
IghmP01872 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
IghmP01872 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
IghmP01872 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
IghmP01872 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
IghmP01872 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
IghmP01872 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
IghmP01872 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
IghmP01872 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
IghmP01872 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
IghmP01872 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.78□□□□□ -0.52
IghmP01872 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
IghmP01872 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
IghmP01872 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
IghmP01872 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
IghmP01872 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
IghmP01872 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
IghmP01872 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.78□□□□□ -0.52
IghmP01872 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
IghmP01872 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.78□□□□□ -0.52
IghmP01872 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.78□□□□□ -0.52
IghmP01872 Gm13492-201ENSMUST00000119772 665 ntBASIC11.78□□□□□ -0.52
IghmP01872 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.78□□□□□ -0.52
IghmP01872 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
IghmP01872 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
IghmP01872 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.78□□□□□ -0.52
IghmP01872 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
IghmP01872 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.78□□□□□ -0.52
IghmP01872 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
IghmP01872 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.78□□□□□ -0.52
IghmP01872 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
IghmP01872 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
IghmP01872 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
IghmP01872 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
IghmP01872 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
IghmP01872 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
IghmP01872 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
IghmP01872 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
IghmP01872 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
IghmP01872 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
IghmP01872 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms