Protein–RNA interactions for Protein: P01139

Ngf, Beta-nerve growth factor, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NgfP01139 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.1□□□□□ -0.63
NgfP01139 AC154680.1-201ENSMUST00000224376 859 ntBASIC11.1□□□□□ -0.63
NgfP01139 Spcs1-203ENSMUST00000226374 592 ntBASIC11.1□□□□□ -0.63
NgfP01139 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
NgfP01139 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
NgfP01139 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
NgfP01139 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
NgfP01139 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
NgfP01139 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
NgfP01139 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
NgfP01139 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
NgfP01139 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
NgfP01139 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
NgfP01139 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
NgfP01139 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
NgfP01139 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.09□□□□□ -0.63
NgfP01139 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
NgfP01139 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
NgfP01139 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
NgfP01139 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
NgfP01139 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
NgfP01139 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
NgfP01139 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
NgfP01139 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
NgfP01139 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.09□□□□□ -0.63
NgfP01139 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
NgfP01139 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
NgfP01139 Gm22133-201ENSMUST00000102082 109 ntBASIC11.09□□□□□ -0.63
NgfP01139 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC11.09□□□□□ -0.63
NgfP01139 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.09□□□□□ -0.63
NgfP01139 Gm9062-201ENSMUST00000117712 727 ntBASIC11.09□□□□□ -0.63
NgfP01139 Gm24514-201ENSMUST00000174961 285 ntBASIC11.09□□□□□ -0.63
NgfP01139 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC11.09□□□□□ -0.63
NgfP01139 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11.09□□□□□ -0.63
NgfP01139 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.09□□□□□ -0.63
NgfP01139 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.09□□□□□ -0.63
NgfP01139 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
NgfP01139 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
NgfP01139 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
NgfP01139 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
NgfP01139 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
NgfP01139 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
NgfP01139 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
NgfP01139 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
NgfP01139 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
NgfP01139 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
NgfP01139 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
NgfP01139 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
NgfP01139 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.63
NgfP01139 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
NgfP01139 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.08□□□□□ -0.63
NgfP01139 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NgfP01139 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NgfP01139 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
NgfP01139 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
NgfP01139 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
NgfP01139 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
NgfP01139 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC11.08□□□□□ -0.64
NgfP01139 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NgfP01139 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.08□□□□□ -0.64
NgfP01139 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
NgfP01139 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.08□□□□□ -0.64
NgfP01139 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC11.08□□□□□ -0.64
NgfP01139 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NgfP01139 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.08□□□□□ -0.64
NgfP01139 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NgfP01139 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.08□□□□□ -0.64
NgfP01139 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NgfP01139 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NgfP01139 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC11.08□□□□□ -0.64
NgfP01139 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NgfP01139 Gm11450-201ENSMUST00000121144 333 ntBASIC11.08□□□□□ -0.64
NgfP01139 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC11.08□□□□□ -0.64
NgfP01139 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
NgfP01139 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC11.08□□□□□ -0.64
NgfP01139 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC11.08□□□□□ -0.64
NgfP01139 Gm18393-201ENSMUST00000208349 1131 ntBASIC11.08□□□□□ -0.64
NgfP01139 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.08□□□□□ -0.64
NgfP01139 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.08□□□□□ -0.64
NgfP01139 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NgfP01139 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NgfP01139 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
NgfP01139 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
NgfP01139 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
NgfP01139 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NgfP01139 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
NgfP01139 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
NgfP01139 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NgfP01139 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC11.08□□□□□ -0.64
NgfP01139 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.08□□□□□ -0.64
NgfP01139 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
NgfP01139 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
NgfP01139 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
NgfP01139 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
NgfP01139 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
NgfP01139 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
NgfP01139 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
NgfP01139 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
NgfP01139 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.08□□□□□ -0.64
NgfP01139 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms