Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Hcn1O88704 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hcn1O88704 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Hcn1O88704 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.11□□□□□ -0.47
Hcn1O88704 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.11□□□□□ -0.47
Hcn1O88704 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hcn1O88704 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hcn1O88704 Mir7221-201ENSMUST00000184009 72 ntBASIC12.11□□□□□ -0.47
Hcn1O88704 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.11□□□□□ -0.47
Hcn1O88704 AY702102-202ENSMUST00000194651 1173 ntBASIC12.11□□□□□ -0.47
Hcn1O88704 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.11□□□□□ -0.47
Hcn1O88704 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hcn1O88704 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hcn1O88704 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hcn1O88704 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hcn1O88704 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hcn1O88704 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.11□□□□□ -0.47
Hcn1O88704 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hcn1O88704 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hcn1O88704 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.11□□□□□ -0.47
Hcn1O88704 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hcn1O88704 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.1□□□□□ -0.47
Hcn1O88704 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.1□□□□□ -0.47
Hcn1O88704 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hcn1O88704 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hcn1O88704 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hcn1O88704 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.1□□□□□ -0.47
Hcn1O88704 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.1□□□□□ -0.47
Hcn1O88704 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hcn1O88704 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hcn1O88704 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hcn1O88704 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hcn1O88704 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hcn1O88704 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Hcn1O88704 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hcn1O88704 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hcn1O88704 Gm11978-201ENSMUST00000122315 466 ntBASIC12.1□□□□□ -0.47
Hcn1O88704 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.1□□□□□ -0.47
Hcn1O88704 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.1□□□□□ -0.47
Hcn1O88704 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hcn1O88704 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hcn1O88704 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.1□□□□□ -0.47
Hcn1O88704 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.1□□□□□ -0.47
Hcn1O88704 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hcn1O88704 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.1□□□□□ -0.47
Hcn1O88704 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.1□□□□□ -0.47
Hcn1O88704 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hcn1O88704 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.1□□□□□ -0.47
Hcn1O88704 Gm10146-201ENSMUST00000072739 309 ntBASIC12.1□□□□□ -0.47
Hcn1O88704 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hcn1O88704 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hcn1O88704 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hcn1O88704 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.1□□□□□ -0.47
Hcn1O88704 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hcn1O88704 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hcn1O88704 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hcn1O88704 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hcn1O88704 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.1□□□□□ -0.47
Hcn1O88704 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hcn1O88704 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.1□□□□□ -0.47
Hcn1O88704 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hcn1O88704 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hcn1O88704 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.1□□□□□ -0.47
Hcn1O88704 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hcn1O88704 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hcn1O88704 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.1□□□□□ -0.47
Hcn1O88704 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hcn1O88704 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hcn1O88704 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.1□□□□□ -0.47
Hcn1O88704 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Hcn1O88704 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hcn1O88704 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hcn1O88704 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hcn1O88704 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hcn1O88704 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hcn1O88704 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.09□□□□□ -0.47
Hcn1O88704 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hcn1O88704 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.09□□□□□ -0.47
Hcn1O88704 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Hcn1O88704 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.09□□□□□ -0.47
Hcn1O88704 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hcn1O88704 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hcn1O88704 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hcn1O88704 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hcn1O88704 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hcn1O88704 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.09□□□□□ -0.47
Hcn1O88704 Gm12384-201ENSMUST00000119228 919 ntBASIC12.09□□□□□ -0.47
Hcn1O88704 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.09□□□□□ -0.47
Hcn1O88704 Snora78-201ENSMUST00000158630 128 ntBASIC12.09□□□□□ -0.47
Hcn1O88704 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hcn1O88704 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Hcn1O88704 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hcn1O88704 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.09□□□□□ -0.47
Hcn1O88704 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.09□□□□□ -0.47
Hcn1O88704 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hcn1O88704 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hcn1O88704 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hcn1O88704 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Hcn1O88704 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hcn1O88704 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms