Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Gm24934-201ENSMUST00000103764 111 ntBASIC13.86□□□□□ -0.19
Trdmt1O55055 Gm13408-201ENSMUST00000119822 798 ntBASIC13.86□□□□□ -0.19
Trdmt1O55055 Gm13935-201ENSMUST00000121859 798 ntBASIC13.86□□□□□ -0.19
Trdmt1O55055 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trdmt1O55055 Gm23119-201ENSMUST00000158610 140 ntBASIC13.86□□□□□ -0.19
Trdmt1O55055 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC13.86□□□□□ -0.19
Trdmt1O55055 Gm44958-201ENSMUST00000203734 736 ntBASIC13.86□□□□□ -0.19
Trdmt1O55055 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC13.86□□□□□ -0.19
Trdmt1O55055 AC154276.3-201ENSMUST00000227643 998 ntBASIC13.86□□□□□ -0.19
Trdmt1O55055 Gm9826-201ENSMUST00000029124 1299 ntBASIC13.86□□□□□ -0.19
Trdmt1O55055 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trdmt1O55055 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Trdmt1O55055 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.86□□□□□ -0.19
Trdmt1O55055 AC123619.2-202ENSMUST00000225097 1568 ntBASIC13.86□□□□□ -0.19
Trdmt1O55055 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trdmt1O55055 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trdmt1O55055 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trdmt1O55055 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trdmt1O55055 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
Trdmt1O55055 AC159308.2-201ENSMUST00000213592 2325 ntBASIC13.86□□□□□ -0.19
Trdmt1O55055 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trdmt1O55055 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trdmt1O55055 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trdmt1O55055 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trdmt1O55055 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trdmt1O55055 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.86□□□□□ -0.19
Trdmt1O55055 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trdmt1O55055 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trdmt1O55055 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trdmt1O55055 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trdmt1O55055 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trdmt1O55055 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trdmt1O55055 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trdmt1O55055 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trdmt1O55055 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trdmt1O55055 Gm22133-201ENSMUST00000102082 109 ntBASIC13.85□□□□□ -0.19
Trdmt1O55055 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trdmt1O55055 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trdmt1O55055 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.85□□□□□ -0.19
Trdmt1O55055 Gm13045-201ENSMUST00000119019 712 ntBASIC13.85□□□□□ -0.19
Trdmt1O55055 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC13.85□□□□□ -0.19
Trdmt1O55055 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC13.85□□□□□ -0.19
Trdmt1O55055 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC13.85□□□□□ -0.19
Trdmt1O55055 Gm43962-201ENSMUST00000203898 190 ntBASIC13.85□□□□□ -0.19
Trdmt1O55055 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC13.85□□□□□ -0.19
Trdmt1O55055 AC159819.2-201ENSMUST00000216151 342 ntBASIC13.85□□□□□ -0.19
Trdmt1O55055 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trdmt1O55055 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trdmt1O55055 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trdmt1O55055 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trdmt1O55055 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trdmt1O55055 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trdmt1O55055 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trdmt1O55055 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trdmt1O55055 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trdmt1O55055 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trdmt1O55055 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.85□□□□□ -0.19
Trdmt1O55055 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trdmt1O55055 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trdmt1O55055 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trdmt1O55055 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trdmt1O55055 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trdmt1O55055 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trdmt1O55055 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trdmt1O55055 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.84□□□□□ -0.19
Trdmt1O55055 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trdmt1O55055 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trdmt1O55055 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trdmt1O55055 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.84□□□□□ -0.19
Trdmt1O55055 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trdmt1O55055 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trdmt1O55055 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trdmt1O55055 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trdmt1O55055 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trdmt1O55055 Gm43858-201ENSMUST00000199418 1778 ntBASIC13.84□□□□□ -0.19
Trdmt1O55055 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trdmt1O55055 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trdmt1O55055 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trdmt1O55055 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC13.84□□□□□ -0.19
Trdmt1O55055 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC13.84□□□□□ -0.19
Trdmt1O55055 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC13.84□□□□□ -0.19
Trdmt1O55055 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC13.84□□□□□ -0.19
Trdmt1O55055 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC13.84□□□□□ -0.19
Trdmt1O55055 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC13.84□□□□□ -0.19
Trdmt1O55055 Gm19353-201ENSMUST00000184561 445 ntBASIC13.84□□□□□ -0.19
Trdmt1O55055 Gm18038-201ENSMUST00000197900 485 ntBASIC13.84□□□□□ -0.19
Trdmt1O55055 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC13.84□□□□□ -0.19
Trdmt1O55055 Gm45770-201ENSMUST00000212105 616 ntBASIC13.84□□□□□ -0.19
Trdmt1O55055 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC13.84□□□□□ -0.19
Trdmt1O55055 Ntng1-201ENSMUST00000051253 327 ntBASIC13.84□□□□□ -0.19
Trdmt1O55055 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC13.84□□□□□ -0.19
Trdmt1O55055 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trdmt1O55055 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trdmt1O55055 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trdmt1O55055 Gm5525-201ENSMUST00000190438 1312 ntBASIC13.84□□□□□ -0.19
Trdmt1O55055 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trdmt1O55055 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trdmt1O55055 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trdmt1O55055 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trdmt1O55055 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms