Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Hmgb3O54879 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hmgb3O54879 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hmgb3O54879 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Hmgb3O54879 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hmgb3O54879 Gm20796-201ENSMUST00000180355 5838 ntBASIC10.43□□□□□ -0.74
Hmgb3O54879 Daam2-202ENSMUST00000224595 1926 ntBASIC10.43□□□□□ -0.74
Hmgb3O54879 AC166574.4-201ENSMUST00000227165 1937 ntBASIC10.43□□□□□ -0.74
Hmgb3O54879 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Hmgb3O54879 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hmgb3O54879 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hmgb3O54879 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hmgb3O54879 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hmgb3O54879 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Hmgb3O54879 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hmgb3O54879 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC10.42□□□□□ -0.74
Hmgb3O54879 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hmgb3O54879 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hmgb3O54879 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hmgb3O54879 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hmgb3O54879 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hmgb3O54879 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC10.42□□□□□ -0.74
Hmgb3O54879 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hmgb3O54879 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.42□□□□□ -0.74
Hmgb3O54879 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hmgb3O54879 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hmgb3O54879 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hmgb3O54879 Gm4995-201ENSMUST00000117247 432 ntBASIC10.42□□□□□ -0.74
Hmgb3O54879 Gm15240-201ENSMUST00000118156 720 ntBASIC10.42□□□□□ -0.74
Hmgb3O54879 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC10.42□□□□□ -0.74
Hmgb3O54879 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hmgb3O54879 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC10.42□□□□□ -0.74
Hmgb3O54879 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hmgb3O54879 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hmgb3O54879 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC10.42□□□□□ -0.74
Hmgb3O54879 Gm5264-201ENSMUST00000190584 848 ntBASIC10.42□□□□□ -0.74
Hmgb3O54879 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hmgb3O54879 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hmgb3O54879 Gm7774-201ENSMUST00000200064 533 ntBASIC10.42□□□□□ -0.74
Hmgb3O54879 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Hmgb3O54879 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC10.42□□□□□ -0.74
Hmgb3O54879 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hmgb3O54879 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Hmgb3O54879 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hmgb3O54879 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hmgb3O54879 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC10.42□□□□□ -0.74
Hmgb3O54879 Gm43721-201ENSMUST00000199677 2313 ntBASIC10.42□□□□□ -0.74
Hmgb3O54879 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hmgb3O54879 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hmgb3O54879 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hmgb3O54879 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC10.42□□□□□ -0.74
Hmgb3O54879 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hmgb3O54879 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hmgb3O54879 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hmgb3O54879 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hmgb3O54879 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hmgb3O54879 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hmgb3O54879 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hmgb3O54879 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hmgb3O54879 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC10.42□□□□□ -0.74
Hmgb3O54879 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Hmgb3O54879 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hmgb3O54879 Gm43321-201ENSMUST00000198897 2409 ntBASIC10.42□□□□□ -0.74
Hmgb3O54879 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgb3O54879 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgb3O54879 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgb3O54879 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgb3O54879 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgb3O54879 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgb3O54879 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgb3O54879 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Hmgb3O54879 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgb3O54879 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Hmgb3O54879 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
Hmgb3O54879 Gm43061-201ENSMUST00000198850 2241 ntBASIC10.41□□□□□ -0.74
Hmgb3O54879 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgb3O54879 Gm6210-201ENSMUST00000204734 1942 ntBASIC10.41□□□□□ -0.74
Hmgb3O54879 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgb3O54879 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgb3O54879 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgb3O54879 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgb3O54879 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgb3O54879 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgb3O54879 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC10.41□□□□□ -0.74
Hmgb3O54879 Gm18983-201ENSMUST00000222884 2729 ntBASIC10.41□□□□□ -0.74
Hmgb3O54879 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgb3O54879 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC10.41□□□□□ -0.74
Hmgb3O54879 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC10.41□□□□□ -0.74
Hmgb3O54879 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC10.41□□□□□ -0.74
Hmgb3O54879 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Hmgb3O54879 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC10.41□□□□□ -0.74
Hmgb3O54879 Gm29608-201ENSMUST00000190444 463 ntBASIC10.41□□□□□ -0.74
Hmgb3O54879 Gm10253-201ENSMUST00000194270 940 ntBASIC10.41□□□□□ -0.74
Hmgb3O54879 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgb3O54879 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgb3O54879 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgb3O54879 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgb3O54879 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgb3O54879 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgb3O54879 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 171.9 ms