Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Alx4O35137 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Alx4O35137 Gm11618-201ENSMUST00000117946 267 ntBASIC11.25□□□□□ -0.61
Alx4O35137 Gm15920-201ENSMUST00000118998 402 ntBASIC11.25□□□□□ -0.61
Alx4O35137 Gm14704-201ENSMUST00000120300 874 ntBASIC11.25□□□□□ -0.61
Alx4O35137 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Alx4O35137 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.25□□□□□ -0.61
Alx4O35137 Auts2-212ENSMUST00000178555 309 ntBASIC11.25□□□□□ -0.61
Alx4O35137 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC11.25□□□□□ -0.61
Alx4O35137 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC11.25□□□□□ -0.61
Alx4O35137 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.25□□□□□ -0.61
Alx4O35137 Gm44872-201ENSMUST00000207864 420 ntBASIC11.25□□□□□ -0.61
Alx4O35137 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
Alx4O35137 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC11.25□□□□□ -0.61
Alx4O35137 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.25□□□□□ -0.61
Alx4O35137 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.25□□□□□ -0.61
Alx4O35137 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Alx4O35137 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Alx4O35137 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Alx4O35137 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Alx4O35137 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Alx4O35137 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Alx4O35137 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Alx4O35137 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Alx4O35137 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Alx4O35137 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Alx4O35137 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Alx4O35137 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Alx4O35137 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Alx4O35137 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Alx4O35137 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Alx4O35137 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Alx4O35137 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.25□□□□□ -0.61
Alx4O35137 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.25□□□□□ -0.61
Alx4O35137 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.25□□□□□ -0.61
Alx4O35137 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Alx4O35137 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Alx4O35137 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
Alx4O35137 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.25□□□□□ -0.61
Alx4O35137 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Alx4O35137 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Alx4O35137 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Alx4O35137 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Alx4O35137 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Alx4O35137 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Alx4O35137 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Alx4O35137 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Alx4O35137 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Alx4O35137 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.24□□□□□ -0.61
Alx4O35137 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Alx4O35137 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.24□□□□□ -0.61
Alx4O35137 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Alx4O35137 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.24□□□□□ -0.61
Alx4O35137 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Alx4O35137 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Alx4O35137 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Alx4O35137 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Alx4O35137 Gm24231-201ENSMUST00000104315 133 ntBASIC11.24□□□□□ -0.61
Alx4O35137 Gm11637-201ENSMUST00000120601 592 ntBASIC11.24□□□□□ -0.61
Alx4O35137 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Alx4O35137 Gm16296-201ENSMUST00000159905 325 ntBASIC11.24□□□□□ -0.61
Alx4O35137 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC11.24□□□□□ -0.61
Alx4O35137 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.24□□□□□ -0.61
Alx4O35137 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Alx4O35137 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.24□□□□□ -0.61
Alx4O35137 AC238811.3-201ENSMUST00000225422 709 ntBASIC11.24□□□□□ -0.61
Alx4O35137 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Alx4O35137 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Alx4O35137 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Alx4O35137 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Alx4O35137 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Alx4O35137 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.24□□□□□ -0.61
Alx4O35137 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Alx4O35137 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Alx4O35137 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Alx4O35137 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Alx4O35137 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Alx4O35137 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Alx4O35137 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Alx4O35137 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Alx4O35137 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Alx4O35137 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Alx4O35137 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Alx4O35137 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Alx4O35137 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Alx4O35137 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Alx4O35137 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Alx4O35137 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Alx4O35137 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Alx4O35137 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Alx4O35137 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Alx4O35137 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Alx4O35137 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Alx4O35137 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.23□□□□□ -0.61
Alx4O35137 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Alx4O35137 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Alx4O35137 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Alx4O35137 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Alx4O35137 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Alx4O35137 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms