Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Ube3aO08759 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ube3aO08759 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ube3aO08759 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.64□□□□□ -0.23
Ube3aO08759 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13.64□□□□□ -0.23
Ube3aO08759 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ube3aO08759 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ube3aO08759 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ube3aO08759 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC13.63□□□□□ -0.23
Ube3aO08759 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ube3aO08759 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ube3aO08759 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Ube3aO08759 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ube3aO08759 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.63□□□□□ -0.23
Ube3aO08759 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.63□□□□□ -0.23
Ube3aO08759 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.63□□□□□ -0.23
Ube3aO08759 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Ube3aO08759 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.63□□□□□ -0.23
Ube3aO08759 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Ube3aO08759 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.63□□□□□ -0.23
Ube3aO08759 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.63□□□□□ -0.23
Ube3aO08759 Gm8515-201ENSMUST00000194852 576 ntBASIC13.63□□□□□ -0.23
Ube3aO08759 Gm18018-201ENSMUST00000198273 408 ntBASIC13.63□□□□□ -0.23
Ube3aO08759 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.63□□□□□ -0.23
Ube3aO08759 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ube3aO08759 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ube3aO08759 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ube3aO08759 Gm15823-201ENSMUST00000064305 670 ntBASIC13.63□□□□□ -0.23
Ube3aO08759 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ube3aO08759 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Ube3aO08759 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Ube3aO08759 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ube3aO08759 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Ube3aO08759 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Ube3aO08759 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ube3aO08759 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Ube3aO08759 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ube3aO08759 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ube3aO08759 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ube3aO08759 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ube3aO08759 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.62□□□□□ -0.23
Ube3aO08759 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.62□□□□□ -0.23
Ube3aO08759 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.62□□□□□ -0.23
Ube3aO08759 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ube3aO08759 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ube3aO08759 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ube3aO08759 Gm14921-201ENSMUST00000118643 908 ntBASIC13.62□□□□□ -0.23
Ube3aO08759 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.62□□□□□ -0.23
Ube3aO08759 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.62□□□□□ -0.23
Ube3aO08759 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.62□□□□□ -0.23
Ube3aO08759 Gm23984-201ENSMUST00000157139 203 ntBASIC13.62□□□□□ -0.23
Ube3aO08759 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ube3aO08759 Gm37917-201ENSMUST00000194711 392 ntBASIC13.62□□□□□ -0.23
Ube3aO08759 Gm6745-201ENSMUST00000199216 526 ntBASIC13.62□□□□□ -0.23
Ube3aO08759 Gm45668-201ENSMUST00000211271 493 ntBASIC13.62□□□□□ -0.23
Ube3aO08759 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.62□□□□□ -0.23
Ube3aO08759 Gm6180-201ENSMUST00000065243 498 ntBASIC13.62□□□□□ -0.23
Ube3aO08759 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ube3aO08759 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC13.62□□□□□ -0.23
Ube3aO08759 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.62□□□□□ -0.23
Ube3aO08759 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ube3aO08759 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ube3aO08759 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ube3aO08759 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Ube3aO08759 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ube3aO08759 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ube3aO08759 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ube3aO08759 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ube3aO08759 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Ube3aO08759 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Ube3aO08759 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ube3aO08759 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC13.61□□□□□ -0.23
Ube3aO08759 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ube3aO08759 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC13.61□□□□□ -0.23
Ube3aO08759 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ube3aO08759 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ube3aO08759 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ube3aO08759 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ube3aO08759 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ube3aO08759 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.61□□□□□ -0.23
Ube3aO08759 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ube3aO08759 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.61□□□□□ -0.23
Ube3aO08759 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.61□□□□□ -0.23
Ube3aO08759 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.61□□□□□ -0.23
Ube3aO08759 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ube3aO08759 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ube3aO08759 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ube3aO08759 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Ube3aO08759 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC13.61□□□□□ -0.23
Ube3aO08759 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC13.6□□□□□ -0.23
Ube3aO08759 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Ube3aO08759 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ube3aO08759 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ube3aO08759 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ube3aO08759 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ube3aO08759 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ube3aO08759 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.6□□□□□ -0.23
Ube3aO08759 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ube3aO08759 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ube3aO08759 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms