Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gm3139J3QK78 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gm3139J3QK78 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm3139J3QK78 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm3139J3QK78 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gm3139J3QK78 Gm23270-201ENSMUST00000104055 131 ntBASIC12.56□□□□□ -0.4
Gm3139J3QK78 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Gm3139J3QK78 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.56□□□□□ -0.4
Gm3139J3QK78 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.56□□□□□ -0.4
Gm3139J3QK78 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Gm3139J3QK78 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Gm3139J3QK78 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm3139J3QK78 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.56□□□□□ -0.4
Gm3139J3QK78 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Gm3139J3QK78 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.56□□□□□ -0.4
Gm3139J3QK78 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.56□□□□□ -0.4
Gm3139J3QK78 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.56□□□□□ -0.4
Gm3139J3QK78 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm3139J3QK78 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm3139J3QK78 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm3139J3QK78 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Gm3139J3QK78 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Gm3139J3QK78 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm3139J3QK78 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm3139J3QK78 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm3139J3QK78 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm3139J3QK78 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm3139J3QK78 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gm3139J3QK78 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Gm3139J3QK78 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Gm3139J3QK78 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Gm3139J3QK78 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Gm3139J3QK78 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Gm3139J3QK78 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3139J3QK78 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3139J3QK78 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3139J3QK78 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3139J3QK78 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3139J3QK78 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3139J3QK78 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3139J3QK78 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3139J3QK78 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Gm3139J3QK78 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3139J3QK78 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3139J3QK78 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3139J3QK78 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Gm3139J3QK78 Gm11930-201ENSMUST00000117788 190 ntBASIC12.55□□□□□ -0.4
Gm3139J3QK78 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3139J3QK78 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3139J3QK78 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.55□□□□□ -0.4
Gm3139J3QK78 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.55□□□□□ -0.4
Gm3139J3QK78 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.55□□□□□ -0.4
Gm3139J3QK78 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3139J3QK78 Gm39404-201ENSMUST00000216350 313 ntBASIC12.55□□□□□ -0.4
Gm3139J3QK78 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.55□□□□□ -0.4
Gm3139J3QK78 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3139J3QK78 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Gm3139J3QK78 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3139J3QK78 Gm26035-201ENSMUST00000083065 308 ntBASIC12.55□□□□□ -0.4
Gm3139J3QK78 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.55□□□□□ -0.4
Gm3139J3QK78 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3139J3QK78 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.55□□□□□ -0.4
Gm3139J3QK78 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3139J3QK78 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.55□□□□□ -0.4
Gm3139J3QK78 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3139J3QK78 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3139J3QK78 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3139J3QK78 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3139J3QK78 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3139J3QK78 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Gm3139J3QK78 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Gm3139J3QK78 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3139J3QK78 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3139J3QK78 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3139J3QK78 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3139J3QK78 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3139J3QK78 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3139J3QK78 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm3139J3QK78 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.54□□□□□ -0.4
Gm3139J3QK78 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm3139J3QK78 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gm3139J3QK78 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm3139J3QK78 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm3139J3QK78 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Gm3139J3QK78 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm3139J3QK78 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm3139J3QK78 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gm3139J3QK78 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.54□□□□□ -0.4
Gm3139J3QK78 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gm3139J3QK78 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm3139J3QK78 Gm26083-201ENSMUST00000157904 193 ntBASIC12.54□□□□□ -0.4
Gm3139J3QK78 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gm3139J3QK78 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gm3139J3QK78 Gm3096-201ENSMUST00000185770 364 ntBASIC12.54□□□□□ -0.4
Gm3139J3QK78 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.54□□□□□ -0.4
Gm3139J3QK78 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.54□□□□□ -0.4
Gm3139J3QK78 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Gm3139J3QK78 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Gm3139J3QK78 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.54□□□□□ -0.4
Gm3139J3QK78 Gm9257-201ENSMUST00000221254 232 ntBASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms