Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.95□□□□□ -0.34
Atf6F6VAN0 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.95□□□□□ -0.34
Atf6F6VAN0 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Atf6F6VAN0 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Atf6F6VAN0 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.95□□□□□ -0.34
Atf6F6VAN0 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Atf6F6VAN0 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.95□□□□□ -0.34
Atf6F6VAN0 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.95□□□□□ -0.34
Atf6F6VAN0 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.95□□□□□ -0.34
Atf6F6VAN0 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Atf6F6VAN0 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.95□□□□□ -0.34
Atf6F6VAN0 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Atf6F6VAN0 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Atf6F6VAN0 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Atf6F6VAN0 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.95□□□□□ -0.34
Atf6F6VAN0 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.95□□□□□ -0.34
Atf6F6VAN0 AC154532.1-201ENSMUST00000227860 965 ntBASIC12.95□□□□□ -0.34
Atf6F6VAN0 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.95□□□□□ -0.34
Atf6F6VAN0 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Atf6F6VAN0 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Atf6F6VAN0 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Atf6F6VAN0 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Atf6F6VAN0 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Atf6F6VAN0 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Atf6F6VAN0 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Atf6F6VAN0 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Atf6F6VAN0 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.95□□□□□ -0.34
Atf6F6VAN0 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Atf6F6VAN0 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.95□□□□□ -0.34
Atf6F6VAN0 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Atf6F6VAN0 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Atf6F6VAN0 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Atf6F6VAN0 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Atf6F6VAN0 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Atf6F6VAN0 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Atf6F6VAN0 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Atf6F6VAN0 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Atf6F6VAN0 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Atf6F6VAN0 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Atf6F6VAN0 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Atf6F6VAN0 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Atf6F6VAN0 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Atf6F6VAN0 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Atf6F6VAN0 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.94□□□□□ -0.34
Atf6F6VAN0 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.94□□□□□ -0.34
Atf6F6VAN0 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Atf6F6VAN0 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Atf6F6VAN0 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.94□□□□□ -0.34
Atf6F6VAN0 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Atf6F6VAN0 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.94□□□□□ -0.34
Atf6F6VAN0 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.94□□□□□ -0.34
Atf6F6VAN0 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Atf6F6VAN0 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Atf6F6VAN0 Gm38092-201ENSMUST00000195600 653 ntBASIC12.94□□□□□ -0.34
Atf6F6VAN0 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.94□□□□□ -0.34
Atf6F6VAN0 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.94□□□□□ -0.34
Atf6F6VAN0 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.94□□□□□ -0.34
Atf6F6VAN0 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Atf6F6VAN0 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Atf6F6VAN0 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Atf6F6VAN0 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Atf6F6VAN0 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Atf6F6VAN0 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Atf6F6VAN0 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Atf6F6VAN0 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Atf6F6VAN0 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Atf6F6VAN0 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Atf6F6VAN0 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Atf6F6VAN0 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Atf6F6VAN0 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Atf6F6VAN0 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.93□□□□□ -0.34
Atf6F6VAN0 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Atf6F6VAN0 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Atf6F6VAN0 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Atf6F6VAN0 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Atf6F6VAN0 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Atf6F6VAN0 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Atf6F6VAN0 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Atf6F6VAN0 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.93□□□□□ -0.34
Atf6F6VAN0 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.93□□□□□ -0.34
Atf6F6VAN0 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Atf6F6VAN0 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.93□□□□□ -0.34
Atf6F6VAN0 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Atf6F6VAN0 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.93□□□□□ -0.34
Atf6F6VAN0 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.93□□□□□ -0.34
Atf6F6VAN0 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Atf6F6VAN0 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Atf6F6VAN0 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Atf6F6VAN0 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.93□□□□□ -0.34
Atf6F6VAN0 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Atf6F6VAN0 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Atf6F6VAN0 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Atf6F6VAN0 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Atf6F6VAN0 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Atf6F6VAN0 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Atf6F6VAN0 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Atf6F6VAN0 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.93□□□□□ -0.34
Atf6F6VAN0 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Atf6F6VAN0 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Atf6F6VAN0 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms