Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Syngap1F6SEU4 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Syngap1F6SEU4 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Syngap1F6SEU4 Gm14109-201ENSMUST00000118814 309 ntBASIC14.19□□□□□ -0.14
Syngap1F6SEU4 Gm6161-201ENSMUST00000121942 1102 ntBASIC14.19□□□□□ -0.14
Syngap1F6SEU4 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Syngap1F6SEU4 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC14.19□□□□□ -0.14
Syngap1F6SEU4 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Syngap1F6SEU4 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC14.19□□□□□ -0.14
Syngap1F6SEU4 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Syngap1F6SEU4 Gm6254-201ENSMUST00000168178 1072 ntBASIC14.19□□□□□ -0.14
Syngap1F6SEU4 Gm6153-201ENSMUST00000172004 1058 ntBASIC14.19□□□□□ -0.14
Syngap1F6SEU4 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC14.19□□□□□ -0.14
Syngap1F6SEU4 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Syngap1F6SEU4 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC14.19□□□□□ -0.14
Syngap1F6SEU4 Gm5641-202ENSMUST00000198699 1080 ntBASIC14.19□□□□□ -0.14
Syngap1F6SEU4 Gm44552-201ENSMUST00000205458 1247 ntBASIC14.19□□□□□ -0.14
Syngap1F6SEU4 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Syngap1F6SEU4 AC161537.1-201ENSMUST00000226199 1015 ntBASIC14.19□□□□□ -0.14
Syngap1F6SEU4 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Syngap1F6SEU4 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Syngap1F6SEU4 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Syngap1F6SEU4 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Syngap1F6SEU4 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Syngap1F6SEU4 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Syngap1F6SEU4 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Syngap1F6SEU4 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Syngap1F6SEU4 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Syngap1F6SEU4 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Syngap1F6SEU4 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Syngap1F6SEU4 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Syngap1F6SEU4 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Syngap1F6SEU4 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Syngap1F6SEU4 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.18□□□□□ -0.14
Syngap1F6SEU4 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Syngap1F6SEU4 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Syngap1F6SEU4 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Syngap1F6SEU4 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Syngap1F6SEU4 Gm22121-201ENSMUST00000175148 54 ntBASIC14.18□□□□□ -0.14
Syngap1F6SEU4 Gm25700-201ENSMUST00000177693 110 ntBASIC14.18□□□□□ -0.14
Syngap1F6SEU4 Gm28324-201ENSMUST00000187913 264 ntBASIC14.18□□□□□ -0.14
Syngap1F6SEU4 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC14.18□□□□□ -0.14
Syngap1F6SEU4 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Syngap1F6SEU4 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Syngap1F6SEU4 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Syngap1F6SEU4 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Syngap1F6SEU4 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Syngap1F6SEU4 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Syngap1F6SEU4 Gm19221-201ENSMUST00000221827 1477 ntBASIC14.18□□□□□ -0.14
Syngap1F6SEU4 Tmed9-203ENSMUST00000224741 1450 ntBASIC14.18□□□□□ -0.14
Syngap1F6SEU4 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Syngap1F6SEU4 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Syngap1F6SEU4 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Syngap1F6SEU4 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Syngap1F6SEU4 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Syngap1F6SEU4 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC14.18□□□□□ -0.14
Syngap1F6SEU4 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Syngap1F6SEU4 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Syngap1F6SEU4 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Syngap1F6SEU4 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Syngap1F6SEU4 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC14.18□□□□□ -0.14
Syngap1F6SEU4 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Syngap1F6SEU4 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Syngap1F6SEU4 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Syngap1F6SEU4 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Syngap1F6SEU4 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC14.17□□□□□ -0.14
Syngap1F6SEU4 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Syngap1F6SEU4 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Syngap1F6SEU4 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Syngap1F6SEU4 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Syngap1F6SEU4 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC14.17□□□□□ -0.14
Syngap1F6SEU4 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC14.17□□□□□ -0.14
Syngap1F6SEU4 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Syngap1F6SEU4 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Syngap1F6SEU4 Gm23153-201ENSMUST00000175323 313 ntBASIC14.17□□□□□ -0.14
Syngap1F6SEU4 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC14.17□□□□□ -0.14
Syngap1F6SEU4 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Syngap1F6SEU4 Gm8492-201ENSMUST00000182375 987 ntBASIC14.17□□□□□ -0.14
Syngap1F6SEU4 Gm38297-201ENSMUST00000195122 1057 ntBASIC14.17□□□□□ -0.14
Syngap1F6SEU4 Gm45550-201ENSMUST00000209380 946 ntBASIC14.17□□□□□ -0.14
Syngap1F6SEU4 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Syngap1F6SEU4 AC123665.1-201ENSMUST00000228204 438 ntBASIC14.17□□□□□ -0.14
Syngap1F6SEU4 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Syngap1F6SEU4 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Syngap1F6SEU4 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Syngap1F6SEU4 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Syngap1F6SEU4 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Syngap1F6SEU4 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Syngap1F6SEU4 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Syngap1F6SEU4 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Syngap1F6SEU4 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.17□□□□□ -0.14
Syngap1F6SEU4 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Syngap1F6SEU4 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Syngap1F6SEU4 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Syngap1F6SEU4 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Syngap1F6SEU4 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Syngap1F6SEU4 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Syngap1F6SEU4 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Syngap1F6SEU4 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Syngap1F6SEU4 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms