Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ube4aE9Q735 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ube4aE9Q735 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ube4aE9Q735 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ube4aE9Q735 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ube4aE9Q735 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ube4aE9Q735 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC15.1■□□□□ 0.01
Ube4aE9Q735 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ube4aE9Q735 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC15.1■□□□□ 0.01
Ube4aE9Q735 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC15.1■□□□□ 0.01
Ube4aE9Q735 Gm28071-201ENSMUST00000190355 478 ntBASIC15.1■□□□□ 0.01
Ube4aE9Q735 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ube4aE9Q735 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC15.1■□□□□ 0.01
Ube4aE9Q735 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ube4aE9Q735 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Ube4aE9Q735 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ube4aE9Q735 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ube4aE9Q735 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC15.1■□□□□ 0.01
Ube4aE9Q735 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ube4aE9Q735 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ube4aE9Q735 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Ube4aE9Q735 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ube4aE9Q735 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Ube4aE9Q735 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ube4aE9Q735 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ube4aE9Q735 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ube4aE9Q735 Gm43045-201ENSMUST00000198725 2095 ntBASIC15.1■□□□□ 0.01
Ube4aE9Q735 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ube4aE9Q735 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ube4aE9Q735 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Ube4aE9Q735 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ube4aE9Q735 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ube4aE9Q735 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC15.09■□□□□ 0.01
Ube4aE9Q735 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ube4aE9Q735 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC15.09■□□□□ 0.01
Ube4aE9Q735 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ube4aE9Q735 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC15.09■□□□□ 0.01
Ube4aE9Q735 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Ube4aE9Q735 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Ube4aE9Q735 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ube4aE9Q735 Gm12176-201ENSMUST00000121420 875 ntBASIC15.09■□□□□ 0.01
Ube4aE9Q735 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
Ube4aE9Q735 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC15.09■□□□□ 0.01
Ube4aE9Q735 Gm42863-201ENSMUST00000197875 2958 ntBASIC15.09■□□□□ 0.01
Ube4aE9Q735 Gm43947-201ENSMUST00000203019 959 ntBASIC15.09■□□□□ 0.01
Ube4aE9Q735 Gm44136-201ENSMUST00000203819 1106 ntBASIC15.09■□□□□ 0.01
Ube4aE9Q735 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ube4aE9Q735 Gm26035-201ENSMUST00000083065 308 ntBASIC15.09■□□□□ 0.01
Ube4aE9Q735 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ube4aE9Q735 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Ube4aE9Q735 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC15.09■□□□□ 0.01
Ube4aE9Q735 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ube4aE9Q735 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ube4aE9Q735 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Ube4aE9Q735 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC15.08■□□□□ 0.01
Ube4aE9Q735 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ube4aE9Q735 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ube4aE9Q735 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Ube4aE9Q735 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ube4aE9Q735 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC15.08■□□□□ 0.01
Ube4aE9Q735 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ube4aE9Q735 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ube4aE9Q735 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC15.08■□□□□ 0
Ube4aE9Q735 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Ube4aE9Q735 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ube4aE9Q735 Gm43721-201ENSMUST00000199677 2313 ntBASIC15.08■□□□□ 0
Ube4aE9Q735 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ube4aE9Q735 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC15.08■□□□□ 0
Ube4aE9Q735 Gm20426-201ENSMUST00000173657 440 ntBASIC15.08■□□□□ 0
Ube4aE9Q735 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC15.08■□□□□ 0
Ube4aE9Q735 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ube4aE9Q735 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ube4aE9Q735 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Ube4aE9Q735 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ube4aE9Q735 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Ube4aE9Q735 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ube4aE9Q735 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ube4aE9Q735 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC15.08■□□□□ 0
Ube4aE9Q735 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ube4aE9Q735 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC15.08■□□□□ 0
Ube4aE9Q735 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Ube4aE9Q735 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ube4aE9Q735 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ube4aE9Q735 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ube4aE9Q735 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ube4aE9Q735 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ube4aE9Q735 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ube4aE9Q735 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ube4aE9Q735 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ube4aE9Q735 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Ube4aE9Q735 Gm22133-201ENSMUST00000102082 109 ntBASIC15.07■□□□□ 0
Ube4aE9Q735 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ube4aE9Q735 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC15.07■□□□□ 0
Ube4aE9Q735 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC15.07■□□□□ 0
Ube4aE9Q735 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC15.07■□□□□ 0
Ube4aE9Q735 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC15.07■□□□□ 0
Ube4aE9Q735 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC15.07■□□□□ 0
Ube4aE9Q735 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC15.07■□□□□ 0
Ube4aE9Q735 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC15.07■□□□□ 0
Ube4aE9Q735 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms